Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs12055679	0.81[EUR][1000 genomes]
rs12192535	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1405848	0.89[ASN][1000 genomes]
rs1852578	0.89[ASN][1000 genomes]
rs1918478	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2222722	0.88[ASN][1000 genomes]
rs34602770	0.96[ASN][1000 genomes]
rs4291065	0.85[ASN][1000 genomes]
rs6455418	0.92[ASN][1000 genomes]
rs6902769	0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6903167	0.98[ASN][1000 genomes]
rs7349905	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs763354	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9283841	0.89[ASN][1000 genomes]
rs9342836	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9346470	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9351810	0.91[EUR][1000 genomes]
rs9351811	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9355001	0.98[ASN][1000 genomes]
rs9364165	0.91[EUR][1000 genomes]
rs9364166	0.91[EUR][1000 genomes]
rs9364167	0.91[EUR][1000 genomes]
rs9364168	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830684	chr6:72094842-72282684	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	488 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:72131200-72139400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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