The 2.0 version of rSNPBase

Variant report

Variant rs12224149
Chromosome Location chr11:10142233-10142234
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:10120400-10142800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr11:10122200-10144200 Weak transcription Left Ventricle heart
3 chr11:10122200-10156400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr11:10122800-10142600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr11:10123200-10156400 Weak transcription Fetal Intestine Small intestine
6 chr11:10126200-10143000 Weak transcription Ovary ovary
7 chr11:10131200-10144200 Weak transcription Psoas Muscle Psoas
8 chr11:10131400-10142800 Weak transcription Fetal Brain Male brain
9 chr11:10131800-10143600 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr11:10132200-10143000 Weak transcription Colon Smooth Muscle Colon
11 chr11:10136800-10143000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr11:10137200-10161800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr11:10138400-10143000 Weak transcription NHEK skin
14 chr11:10139000-10144200 Enhancers Hela-S3 cervix
15 chr11:10139800-10143400 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr11:10139800-10144200 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr11:10139800-10144400 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr11:10140000-10143400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr11:10140000-10143400 Weak transcription HMEC breast
20 chr11:10140000-10143600 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr11:10140000-10143800 Weak transcription A549 lung
22 chr11:10140000-10144000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr11:10140000-10144200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr11:10140000-10144200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr11:10140000-10144200 Weak transcription HSMM muscle
26 chr11:10140000-10144200 Weak transcription NH-A brain
27 chr11:10140000-10156200 Weak transcription Fetal Lung lung
28 chr11:10140600-10144000 Weak transcription HSMMtube muscle
29 chr11:10140800-10143400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr11:10141200-10143600 Weak transcription Muscle Satellite Cultured Cells --
31 chr11:10141800-10143400 Weak transcription Osteobl bone
32 chr11:10141800-10144200 Weak transcription Primary hematopoietic stem cells blood
33 chr11:10142000-10143400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr11:10142000-10143400 Weak transcription NHLF lung
35 chr11:10142200-10142600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr11:10142200-10142600 Weak transcription Adipose Nuclei Adipose
37 chr11:10142200-10142600 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015