Variant report
| Variant | rs58652557 |
|---|---|
| Chromosome Location | chr11:10121925-10121926 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:10110400-10122200 | Weak transcription | HSMM | muscle |
| 2 | chr11:10112400-10122000 | Weak transcription | NHLF | lung |
| 3 | chr11:10114000-10123200 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 4 | chr11:10116800-10125400 | Weak transcription | Ovary | ovary |
| 5 | chr11:10116800-10131000 | Weak transcription | Gastric | stomach |
| 6 | chr11:10117200-10131000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 7 | chr11:10117600-10122000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 8 | chr11:10118200-10125800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 9 | chr11:10118400-10123600 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 10 | chr11:10118800-10125600 | Weak transcription | Pancreas | Pancrea |
| 11 | chr11:10119400-10122400 | ZNF genes & repeats | Fetal Lung | lung |
| 12 | chr11:10119800-10125200 | Weak transcription | Aorta | Aorta |
| 13 | chr11:10120000-10122800 | ZNF genes & repeats | Monocytes-CD14+_RO01746 | blood |
| 14 | chr11:10120400-10142800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 15 | chr11:10120600-10123400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 16 | chr11:10120600-10129200 | Weak transcription | Psoas Muscle | Psoas |
| 17 | chr11:10120800-10123400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 18 | chr11:10120800-10131000 | Weak transcription | A549 | lung |
| 19 | chr11:10121000-10129800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 20 | chr11:10121200-10122400 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 21 | chr11:10121200-10123600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 22 | chr11:10121200-10130400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 23 | chr11:10121400-10126000 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 24 | chr11:10121400-10131200 | Weak transcription | Liver | Liver |
| 25 | chr11:10121600-10122200 | ZNF genes & repeats | Stomach Smooth Muscle | stomach |
| 26 | chr11:10121800-10122000 | ZNF genes & repeats | Colonic Mucosa | Colon |
| 27 | chr11:10121800-10122000 | ZNF genes & repeats | Fetal Adrenal Gland | Adrenal Gland |
| 28 | chr11:10121800-10122200 | ZNF genes & repeats | H1 Cell Line | embryonic stem cell |
| 29 | chr11:10121800-10122200 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 30 | chr11:10121800-10122200 | ZNF genes & repeats | Fetal Muscle Trunk | muscle |
| 31 | chr11:10121800-10122200 | ZNF genes & repeats | Left Ventricle | heart |
| 32 | chr11:10121800-10122200 | ZNF genes & repeats | Right Atrium | heart |
| 33 | chr11:10121800-10122200 | ZNF genes & repeats | Dnd41 | blood |
| 34 | chr11:10121800-10122400 | ZNF genes & repeats | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 35 | chr11:10121800-10122400 | ZNF genes & repeats | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 36 | chr11:10121800-10122400 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
| 37 | chr11:10121800-10122400 | ZNF genes & repeats | Fetal Brain Female | brain |
| 38 | chr11:10121800-10122600 | ZNF genes & repeats | Primary hematopoietic stem cells short term culture | blood |
| 39 | chr11:10121800-10122600 | Strong transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 40 | chr11:10121800-10122600 | ZNF genes & repeats | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 41 | chr11:10121800-10122800 | ZNF genes & repeats | IMR90 fetal lung fibroblasts Cell Line | lung |
| 42 | chr11:10121800-10122800 | ZNF genes & repeats | Breast Myoepithelial Primary Cells | Breast |
| 43 | chr11:10121800-10122800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 44 | chr11:10121800-10122800 | ZNF genes & repeats | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 45 | chr11:10121800-10122800 | ZNF genes & repeats | Fetal Stomach | stomach |
| 46 | chr11:10121800-10123000 | ZNF genes & repeats | Cortex derived primary cultured neurospheres | brain |
| 47 | chr11:10121800-10123000 | ZNF genes & repeats | Ganglion Eminence derived primary cultured neurospheres | brain |
| 48 | chr11:10121800-10123000 | ZNF genes & repeats | Fetal Muscle Leg | muscle |
| 49 | chr11:10121800-10123000 | ZNF genes & repeats | Placenta | Placenta |
| 50 | chr11:10121800-10123200 | ZNF genes & repeats | Fetal Intestine Small | intestine |
