The 2.0 version of rSNPBase

Variant report

Variant rs2403290
Chromosome Location chr11:10125592-10125593
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:10116800-10131000 Weak transcription Gastric stomach
2 chr11:10117200-10131000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr11:10118200-10125800 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr11:10118800-10125600 Weak transcription Pancreas Pancrea
5 chr11:10120400-10142800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr11:10120600-10129200 Weak transcription Psoas Muscle Psoas
7 chr11:10120800-10131000 Weak transcription A549 lung
8 chr11:10121000-10129800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr11:10121200-10130400 Weak transcription Muscle Satellite Cultured Cells --
10 chr11:10121400-10126000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr11:10121400-10131200 Weak transcription Liver Liver
12 chr11:10122200-10127200 Weak transcription Right Atrium heart
13 chr11:10122200-10129000 Weak transcription Adipose Nuclei Adipose
14 chr11:10122200-10129000 Weak transcription Stomach Smooth Muscle stomach
15 chr11:10122200-10130800 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr11:10122200-10131000 Weak transcription H1 Cell Line embryonic stem cell
17 chr11:10122200-10144200 Weak transcription Left Ventricle heart
18 chr11:10122200-10156400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr11:10122400-10126000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr11:10122400-10126000 Weak transcription Lung lung
21 chr11:10122400-10127800 Weak transcription Fetal Muscle Trunk muscle
22 chr11:10122400-10129200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr11:10122400-10130800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr11:10122400-10130800 Weak transcription Fetal Lung lung
25 chr11:10122400-10130800 Weak transcription HSMM muscle
26 chr11:10122400-10131200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr11:10122400-10138600 Weak transcription Esophagus oesophagus
28 chr11:10122600-10130400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr11:10122600-10130800 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr11:10122800-10129000 Weak transcription NHLF lung
31 chr11:10122800-10130400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr11:10122800-10130400 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr11:10122800-10131000 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr11:10122800-10132800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr11:10122800-10141200 Weak transcription Monocytes-CD14+_RO01746 blood
36 chr11:10122800-10142600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr11:10123000-10126400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr11:10123000-10130200 Weak transcription Fetal Muscle Leg muscle
39 chr11:10123000-10130400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr11:10123200-10156400 Weak transcription Fetal Intestine Small intestine
41 chr11:10124800-10128000 Weak transcription NHDF-Ad bronchial
42 chr11:10125000-10126000 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr11:10125400-10125600 Enhancers Ovary ovary
44 chr11:10125400-10125800 Weak transcription Aorta Aorta
45 chr11:10125400-10126200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr11:10125400-10126200 Enhancers Right Ventricle heart

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Last update: Aug 31, 2015