The 2.0 version of rSNPBase

Variant report

Variant rs4399321
Chromosome Location chr11:10323478-10323479
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:10316600-10323800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr11:10316600-10323800 Weak transcription Left Ventricle heart
3 chr11:10316600-10323800 Weak transcription Ovary ovary
4 chr11:10316600-10323800 Weak transcription Right Ventricle heart
5 chr11:10316600-10324000 Weak transcription Lung lung
6 chr11:10317000-10323600 Weak transcription Adipose Nuclei Adipose
7 chr11:10317000-10323600 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr11:10317000-10323800 Weak transcription Colonic Mucosa Colon
9 chr11:10317000-10323800 Weak transcription Placenta Placenta
10 chr11:10317000-10323800 Weak transcription Placenta Amnion Placenta Amnion
11 chr11:10317200-10323800 Weak transcription Fetal Adrenal Gland Adrenal Gland
12 chr11:10317200-10323800 Weak transcription Stomach Smooth Muscle stomach
13 chr11:10317400-10323600 Weak transcription Duodenum Mucosa Duodenum
14 chr11:10317800-10323600 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr11:10319600-10323600 Weak transcription HUVEC blood vessel
16 chr11:10319800-10323800 Weak transcription Fetal Heart heart
17 chr11:10320200-10324000 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr11:10320400-10323800 Weak transcription Primary T cells from cord blood blood
19 chr11:10320400-10323800 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr11:10320400-10323800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr11:10320400-10323800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr11:10320400-10324000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr11:10320400-10324000 Weak transcription HSMMtube muscle
24 chr11:10320600-10323600 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr11:10320600-10323600 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr11:10320600-10323600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr11:10320600-10323800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr11:10320600-10323800 Weak transcription Primary T helper naive cells from peripheral blood blood
29 chr11:10320600-10323800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
30 chr11:10320600-10323800 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr11:10320600-10324000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr11:10321000-10323800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr11:10321800-10323600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr11:10322400-10323800 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
35 chr11:10322400-10323800 Enhancers NHLF lung
36 chr11:10322600-10323600 Enhancers Hela-S3 cervix
37 chr11:10322600-10323600 Enhancers Osteobl bone
38 chr11:10322600-10323800 Enhancers HSMM muscle
39 chr11:10322800-10323600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr11:10322800-10323600 Enhancers Primary neutrophils fromperipheralblood blood
41 chr11:10322800-10323600 Weak transcription Fetal Kidney kidney
42 chr11:10322800-10324400 Flanking Active TSS Muscle Satellite Cultured Cells --
43 chr11:10322800-10325000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
44 chr11:10323000-10323600 Weak transcription Brain Hippocampus Middle brain
45 chr11:10323000-10324000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr11:10323200-10323600 Enhancers Fetal Intestine Large intestine
47 chr11:10323200-10323800 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
48 chr11:10323200-10323800 Enhancers Primary monocytes fromperipheralblood blood
49 chr11:10323200-10324000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr11:10323200-10324200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015