Variant report
| Variant | rs12280005 |
|---|---|
| Chromosome Location | chr11:10228452-10228453 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:10208000-10229000 | Weak transcription | Aorta | Aorta |
| 2 | chr11:10208800-10229400 | Weak transcription | NHLF | lung |
| 3 | chr11:10219000-10242200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 4 | chr11:10223800-10229600 | Weak transcription | Osteobl | bone |
| 5 | chr11:10226800-10230000 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 6 | chr11:10227000-10230200 | Enhancers | HUES6 Cell Line | embryonic stem cell |
| 7 | chr11:10227000-10230200 | Enhancers | HUES64 Cell Line | embryonic stem cell |
| 8 | chr11:10227000-10230400 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 9 | chr11:10227200-10229000 | Weak transcription | Ovary | ovary |
| 10 | chr11:10227200-10229200 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 11 | chr11:10227200-10230200 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 12 | chr11:10227400-10235600 | Weak transcription | Psoas Muscle | Psoas |
| 13 | chr11:10227400-10240000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 14 | chr11:10227600-10228600 | Flanking Active TSS | HUES48 Cell Line | embryonic stem cell |
| 15 | chr11:10227600-10232200 | Weak transcription | Right Atrium | heart |
| 16 | chr11:10227600-10240200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 17 | chr11:10227800-10228800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 18 | chr11:10227800-10228800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 19 | chr11:10227800-10229400 | Weak transcription | HepG2 | liver |
| 20 | chr11:10227800-10229600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 21 | chr11:10227800-10229600 | Weak transcription | Liver | Liver |
| 22 | chr11:10227800-10230000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 23 | chr11:10227800-10230200 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
| 24 | chr11:10227800-10239800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 25 | chr11:10227800-10240000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 26 | chr11:10227800-10242600 | Weak transcription | Esophagus | oesophagus |
| 27 | chr11:10228000-10229800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 28 | chr11:10228200-10230400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 29 | chr11:10228400-10229000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 30 | chr11:10228400-10229000 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 31 | chr11:10228400-10229600 | Enhancers | NHDF-Ad | bronchial |
| 32 | chr11:10228400-10230000 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
