Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:85170654..85172676-chr9:85173831..85175866,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11139604	0.82[AMR][1000 genomes]
rs11139608	0.88[AMR][1000 genomes]
rs11139609	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11139610	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11139611	0.86[EUR][1000 genomes]
rs11139614	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11139615	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11139630	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11139631	0.88[EUR][1000 genomes]
rs11139632	0.88[EUR][1000 genomes]
rs11139633	0.88[EUR][1000 genomes]
rs12176641	0.88[EUR][1000 genomes]
rs4146867	0.88[EUR][1000 genomes]
rs67169967	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72737425	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831641	chr9:85145561-85309589	Enhancers ZNF genes & repeats Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:85167200-85174600	Weak transcription	Gastric	stomach
2	chr9:85170000-85176800	Enhancers	HepG2	liver
3	chr9:85170800-85177000	Enhancers	Stomach Mucosa	stomach
4	chr9:85172000-85176000	Enhancers	Liver	Liver
5	chr9:85172200-85174800	Weak transcription	Pancreas	Pancrea
6	chr9:85173200-85175200	Enhancers	Pancreatic Islets	Pancreatic Islet
7	chr9:85173200-85175800	Enhancers	Fetal Intestine Large	intestine
8	chr9:85173400-85175000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr9:85173400-85175400	Weak transcription	Fetal Thymus	thymus
10	chr9:85173400-85175600	Enhancers	ES-I3 Cell Line	embryonic stem cell
11	chr9:85173400-85175800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
12	chr9:85173400-85175800	Enhancers	Fetal Intestine Small	intestine
13	chr9:85173600-85174600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr9:85173800-85174600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr9:85173800-85174600	Enhancers	HUES6 Cell Line	embryonic stem cell
16	chr9:85173800-85174600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr9:85173800-85175400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr9:85173800-85175800	Enhancers	Fetal Lung	lung
19	chr9:85174000-85174400	Weak transcription	Fetal Kidney	kidney
20	chr9:85174000-85175000	Weak transcription	Rectal Mucosa Donor 31	rectum

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