The 2.0 version of rSNPBase

Variant report

Variant rs12238987
Chromosome Location chr1:151765815-151765816
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:151764200-151766000 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr1:151764200-151767200 Weak transcription Colon Smooth Muscle Colon
3 chr1:151764200-151769200 Weak transcription Primary B cells from peripheral blood blood
4 chr1:151764200-151770200 Weak transcription Aorta Aorta
5 chr1:151764200-151772000 Weak transcription Primary T cells fromperipheralblood blood
6 chr1:151764200-151772800 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr1:151764200-151772800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
8 chr1:151764200-151772800 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr1:151764200-151773000 Weak transcription Thymus Thymus
10 chr1:151764200-151778800 Weak transcription Pancreas Pancrea
11 chr1:151764200-151779600 Weak transcription Gastric stomach
12 chr1:151764200-151787000 Weak transcription Right Ventricle heart
13 chr1:151764200-151792800 Weak transcription Lung lung
14 chr1:151764400-151768000 Weak transcription HSMMtube muscle
15 chr1:151764400-151769200 Weak transcription Stomach Smooth Muscle stomach
16 chr1:151764400-151771200 Weak transcription Fetal Intestine Small intestine
17 chr1:151764400-151779200 Weak transcription Liver Liver
18 chr1:151764400-151779800 Weak transcription Brain Angular Gyrus brain
19 chr1:151764600-151767400 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr1:151764600-151768600 Weak transcription Brain Inferior Temporal Lobe brain
21 chr1:151764600-151768800 Weak transcription Brain Anterior Caudate brain
22 chr1:151764600-151770000 Weak transcription Primary T regulatory cells fromperipheralblood blood
23 chr1:151764600-151770200 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr1:151764600-151770600 Weak transcription Rectal Smooth Muscle rectum
25 chr1:151764600-151771200 Weak transcription Adipose Nuclei Adipose
26 chr1:151764600-151771400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr1:151764600-151771400 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr1:151764600-151779400 Weak transcription Brain Cingulate Gyrus brain
29 chr1:151764600-151779400 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr1:151764600-151782000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr1:151764600-151787600 Weak transcription Primary T cells from cord blood blood
32 chr1:151764800-151771400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr1:151765000-151766000 Enhancers Dnd41 blood
34 chr1:151765000-151768400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr1:151765000-151768800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr1:151765000-151771400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr1:151765000-151772200 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr1:151765000-151779400 Weak transcription Brain Hippocampus Middle brain
39 chr1:151765400-151772800 Weak transcription Primary T helper cells fromperipheralblood blood
40 chr1:151765400-151784200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
41 chr1:151765600-151766000 Enhancers Brain Germinal Matrix brain
42 chr1:151765800-151766000 Enhancers Primary T helper naive cells from peripheral blood blood
43 chr1:151765800-151766000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
44 chr1:151765800-151772000 Weak transcription Fetal Brain Female brain

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Last update: Aug 31, 2015