Variant report
Variant | rs7542898 |
---|---|
Chromosome Location | chr1:151753622-151753623 |
allele | G/T |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:151736800-151762600 | Weak transcription | Gastric | stomach |
2 | chr1:151737000-151762400 | Weak transcription | Fetal Intestine Small | intestine |
3 | chr1:151737000-151762400 | Weak transcription | HSMMtube | muscle |
4 | chr1:151737000-151762600 | Weak transcription | Small Intestine | intestine |
5 | chr1:151737200-151753800 | Weak transcription | A549 | lung |
6 | chr1:151740800-151759000 | Weak transcription | Esophagus | oesophagus |
7 | chr1:151741000-151762600 | Weak transcription | Placenta Amnion | Placenta Amnion |
8 | chr1:151741200-151756200 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
9 | chr1:151742400-151755200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
10 | chr1:151742800-151762600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
11 | chr1:151744000-151762200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
12 | chr1:151744600-151762200 | Weak transcription | Primary B cells from cord blood | blood |
13 | chr1:151745400-151755600 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
14 | chr1:151745600-151754400 | Strong transcription | Primary T helper cells PMA-I stimulated | -- |
15 | chr1:151745600-151755400 | Strong transcription | Primary T cells from cord blood | blood |
16 | chr1:151745800-151754600 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
17 | chr1:151745800-151754600 | Strong transcription | Brain Germinal Matrix | brain |
18 | chr1:151745800-151755000 | Strong transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
19 | chr1:151745800-151755400 | Strong transcription | Primary T cells fromperipheralblood | blood |
20 | chr1:151745800-151755600 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
21 | chr1:151745800-151755600 | Strong transcription | Dnd41 | blood |
22 | chr1:151746000-151754600 | Strong transcription | Primary T helper 17 cells PMA-I stimulated | -- |
23 | chr1:151746000-151762400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
24 | chr1:151746200-151754600 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
25 | chr1:151746200-151754600 | Strong transcription | Brain Anterior Caudate | brain |
26 | chr1:151746200-151754800 | Strong transcription | Brain Hippocampus Middle | brain |
27 | chr1:151746200-151755200 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
28 | chr1:151746200-151755600 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
29 | chr1:151746200-151755600 | Strong transcription | Primary T helper naive cells fromperipheralblood | blood |
30 | chr1:151746400-151754400 | Strong transcription | Cortex derived primary cultured neurospheres | brain |
31 | chr1:151746400-151754600 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
32 | chr1:151746800-151762000 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
33 | chr1:151747000-151762400 | Weak transcription | Psoas Muscle | Psoas |
34 | chr1:151747000-151762400 | Weak transcription | Right Ventricle | heart |
35 | chr1:151747200-151759600 | Weak transcription | HMEC | breast |
36 | chr1:151747200-151762400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
37 | chr1:151747600-151762400 | Weak transcription | Pancreas | Pancrea |
38 | chr1:151748400-151761400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
39 | chr1:151748400-151762200 | Weak transcription | Primary hematopoietic stem cells | blood |
40 | chr1:151748600-151762400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
41 | chr1:151748800-151754400 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
42 | chr1:151748800-151761800 | Weak transcription | HepG2 | liver |
43 | chr1:151748800-151762400 | Weak transcription | Colonic Mucosa | Colon |
44 | chr1:151749000-151758800 | Weak transcription | Duodenum Mucosa | Duodenum |
45 | chr1:151749200-151755200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
46 | chr1:151749200-151755800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
47 | chr1:151749200-151762600 | Weak transcription | Spleen | Spleen |
48 | chr1:151749400-151756400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
49 | chr1:151749400-151762400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
50 | chr1:151749600-151762000 | Weak transcription | H1 Cell Line | embryonic stem cell |