The 2.0 version of rSNPBase

Variant report

Variant rs6673917
Chromosome Location chr1:151753108-151753109
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:151736800-151762600 Weak transcription Gastric stomach
2 chr1:151737000-151762400 Weak transcription Fetal Intestine Small intestine
3 chr1:151737000-151762400 Weak transcription HSMMtube muscle
4 chr1:151737000-151762600 Weak transcription Small Intestine intestine
5 chr1:151737200-151753800 Weak transcription A549 lung
6 chr1:151739400-151753200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr1:151740800-151759000 Weak transcription Esophagus oesophagus
8 chr1:151741000-151762600 Weak transcription Placenta Amnion Placenta Amnion
9 chr1:151741200-151756200 Weak transcription Monocytes-CD14+_RO01746 blood
10 chr1:151742400-151755200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr1:151742800-151762600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr1:151744000-151762200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr1:151744600-151762200 Weak transcription Primary B cells from cord blood blood
14 chr1:151745400-151753200 Weak transcription Fetal Kidney kidney
15 chr1:151745400-151755600 Strong transcription Primary T helper cells fromperipheralblood blood
16 chr1:151745600-151754400 Strong transcription Primary T helper cells PMA-I stimulated --
17 chr1:151745600-151755400 Strong transcription Primary T cells from cord blood blood
18 chr1:151745800-151754600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
19 chr1:151745800-151754600 Strong transcription Brain Germinal Matrix brain
20 chr1:151745800-151755000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr1:151745800-151755400 Strong transcription Primary T cells fromperipheralblood blood
22 chr1:151745800-151755600 Strong transcription Primary T regulatory cells fromperipheralblood blood
23 chr1:151745800-151755600 Strong transcription Dnd41 blood
24 chr1:151746000-151754600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
25 chr1:151746000-151762400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr1:151746200-151754600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr1:151746200-151754600 Strong transcription Brain Anterior Caudate brain
28 chr1:151746200-151754800 Strong transcription Brain Hippocampus Middle brain
29 chr1:151746200-151755200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
30 chr1:151746200-151755600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr1:151746200-151755600 Strong transcription Primary T helper naive cells fromperipheralblood blood
32 chr1:151746400-151753400 Strong transcription Brain Cingulate Gyrus brain
33 chr1:151746400-151754400 Strong transcription Cortex derived primary cultured neurospheres brain
34 chr1:151746400-151754600 Strong transcription HUES64 Cell Line embryonic stem cell
35 chr1:151746800-151762000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr1:151747000-151762400 Weak transcription Psoas Muscle Psoas
37 chr1:151747000-151762400 Weak transcription Right Ventricle heart
38 chr1:151747200-151759600 Weak transcription HMEC breast
39 chr1:151747200-151762400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr1:151747600-151762400 Weak transcription Pancreas Pancrea
41 chr1:151748400-151761400 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr1:151748400-151762200 Weak transcription Primary hematopoietic stem cells blood
43 chr1:151748600-151762400 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr1:151748800-151754400 Strong transcription Skeletal Muscle Female skeletal muscle
45 chr1:151748800-151761800 Weak transcription HepG2 liver
46 chr1:151748800-151762400 Weak transcription Colonic Mucosa Colon
47 chr1:151749000-151758800 Weak transcription Duodenum Mucosa Duodenum
48 chr1:151749200-151755200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr1:151749200-151755800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr1:151749200-151762600 Weak transcription Spleen Spleen

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Last update: Aug 31, 2015