Variant report

No.	Distal block	Cell Line	Cell type
1	chr1:151721010..151724509-chr1:151727967..151731258,3	MCF-7	breast:
2	chr1:151722015..151724126-chr1:151837902..151840687,2	K562	blood:
3	chr1:151711863..151713959-chr1:151723622..151725894,2	K562	blood:

Variant related genes	Relation type
ENSG00000269621	Chromatin interaction
ENSG00000236940	Chromatin interaction

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs1054479	0.82[AMR][1000 genomes]
rs10788809	0.81[ASN][1000 genomes]
rs11204884	0.84[ASN][1000 genomes]
rs11576810	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11585294	0.81[ASN][1000 genomes]
rs11586446	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11586946	0.81[ASN][1000 genomes]
rs1196467	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12122917	0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13376155	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17568246	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2489890	0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs3790514	0.82[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs3811415	0.81[ASN][1000 genomes]
rs4618976	0.81[ASN][1000 genomes]
rs4845356	0.81[ASN][1000 genomes]
rs4845570	0.81[ASN][1000 genomes]
rs6659705	0.81[ASN][1000 genomes]
rs6664467	0.84[ASN][1000 genomes]
rs6673002	0.84[ASN][1000 genomes]
rs6673917	0.84[ASN][1000 genomes]
rs6681093	0.81[ASN][1000 genomes]
rs6683364	0.82[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs6694952	0.81[ASN][1000 genomes]
rs7007	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7542898	0.82[AMR][1000 genomes];0.84[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:151712800-151729400	Weak transcription	Skeletal Muscle Female	skeletal muscle
2	chr1:151712800-151731800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr1:151721400-151727600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr1:151721400-151730600	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr1:151722400-151729200	Weak transcription	Duodenum Smooth Muscle	Duodenum
6	chr1:151722800-151729200	Weak transcription	Rectal Mucosa Donor 31	rectum
7	chr1:151723000-151728000	Weak transcription	Cortex derived primary cultured neurospheres	brain
8	chr1:151723000-151729200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr1:151723400-151726800	Weak transcription	Primary T cells from cord blood	blood
10	chr1:151723400-151729000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr1:151723400-151730000	Weak transcription	Placenta Amnion	Placenta Amnion
12	chr1:151723400-151730000	Weak transcription	HSMM	muscle

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