The 2.0 version of rSNPBase

Variant report

Variant rs12265885
Chromosome Location chr10:49622557-49622558
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:49607600-49624200 Weak transcription Gastric stomach
2 chr10:49607600-49624200 Weak transcription Lung lung
3 chr10:49607600-49647800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr10:49607600-49652400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr10:49608000-49645600 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr10:49608200-49634400 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr10:49612000-49664200 Weak transcription Thymus Thymus
8 chr10:49612800-49660200 Weak transcription Aorta Aorta
9 chr10:49614600-49623000 Weak transcription Pancreas Pancrea
10 chr10:49614800-49638400 Weak transcription HUVEC blood vessel
11 chr10:49615000-49622600 Weak transcription HMEC breast
12 chr10:49617200-49624200 Weak transcription Left Ventricle heart
13 chr10:49619000-49664200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr10:49619600-49622800 Weak transcription Osteobl bone
15 chr10:49619600-49628000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
16 chr10:49619600-49634000 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr10:49619600-49645600 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr10:49619800-49634400 Weak transcription iPS-18 Cell Line embryonic stem cell
19 chr10:49620600-49643400 Weak transcription Brain Cingulate Gyrus brain
20 chr10:49620800-49626000 Weak transcription Ovary ovary
21 chr10:49620800-49634000 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr10:49620800-49634400 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr10:49620800-49643400 Weak transcription Right Ventricle heart
24 chr10:49620800-49646800 Weak transcription Hela-S3 cervix
25 chr10:49620800-49647000 Weak transcription NHDF-Ad bronchial
26 chr10:49620800-49647600 Weak transcription Colonic Mucosa Colon
27 chr10:49620800-49652400 Weak transcription H1 Cell Line embryonic stem cell
28 chr10:49620800-49658600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr10:49621000-49625200 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr10:49621000-49638400 Weak transcription Fetal Stomach stomach
31 chr10:49621000-49638800 Weak transcription Brain Germinal Matrix brain
32 chr10:49621200-49624200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr10:49621200-49624400 Weak transcription HSMM muscle
34 chr10:49621200-49625000 Weak transcription Adipose Nuclei Adipose
35 chr10:49621200-49626000 Weak transcription Brain Anterior Caudate brain
36 chr10:49621200-49632000 Weak transcription Psoas Muscle Psoas
37 chr10:49621200-49638400 Weak transcription Fetal Muscle Leg muscle
38 chr10:49621200-49638800 Weak transcription Brain Inferior Temporal Lobe brain
39 chr10:49621200-49641600 Weak transcription Small Intestine intestine
40 chr10:49621200-49641800 Weak transcription Rectal Smooth Muscle rectum
41 chr10:49621200-49643400 Weak transcription Fetal Adrenal Gland Adrenal Gland
42 chr10:49621200-49647000 Weak transcription Fetal Intestine Small intestine
43 chr10:49621200-49647400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr10:49621200-49647800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr10:49621200-49657400 Weak transcription Brain Hippocampus Middle brain
46 chr10:49621400-49622600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr10:49621400-49622600 Weak transcription Muscle Satellite Cultured Cells --
48 chr10:49621400-49622600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr10:49621400-49622600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr10:49621400-49623000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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Last update: Aug 31, 2015