Variant report

Variant	rs12275338
Chromosome Location	chr11:76528365-76528366
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11236952	0.89[EUR][1000 genomes]
rs11236965	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11236967	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11236970	0.86[ASN][1000 genomes]
rs1561647	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2119454	0.81[EUR][1000 genomes]
rs55949612	0.85[ASN][1000 genomes]
rs57152887	0.81[ASN][1000 genomes]
rs57539702	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs58026572	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs58738182	0.81[ASN][1000 genomes]
rs7129920	0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv897931	chr11:76489673-76540708	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76527800-76528800	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
2	chr11:76528200-76528600	Enhancers	Adipose Nuclei	Adipose

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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