Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10219211	1.00[ASN][1000 genomes]
rs10502256	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11218409	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11218414	0.94[ASN][1000 genomes]
rs11218415	0.94[ASN][1000 genomes]
rs11218416	0.94[ASN][1000 genomes]
rs11218435	0.94[ASN][1000 genomes]
rs11218439	0.94[ASN][1000 genomes]
rs12273557	0.94[ASN][1000 genomes]
rs12276466	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12277681	1.00[ASN][1000 genomes]
rs12282527	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12287945	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12290988	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1789763	1.00[ASN][1000 genomes]
rs28378150	0.94[ASN][1000 genomes]
rs543959	1.00[ASN][1000 genomes]
rs61903403	0.94[ASN][1000 genomes]
rs7935547	0.94[ASN][1000 genomes]
rs7938656	0.94[ASN][1000 genomes]
rs7940956	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7941972	0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832287	chr11:121575379-121722735	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:121689800-121692200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood

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