Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10219211	0.95[ASN][1000 genomes]
rs10502256	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11218408	0.82[ASN][1000 genomes]
rs11218409	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11218414	0.89[ASN][1000 genomes]
rs11218415	0.89[ASN][1000 genomes]
rs11218416	0.89[ASN][1000 genomes]
rs11218435	0.89[ASN][1000 genomes]
rs11218439	0.89[ASN][1000 genomes]
rs12273557	0.89[ASN][1000 genomes]
rs12277681	0.95[ASN][1000 genomes]
rs12277948	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12282527	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12287945	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12290988	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1789763	0.95[ASN][1000 genomes]
rs28378150	0.89[ASN][1000 genomes]
rs543959	0.95[ASN][1000 genomes]
rs61903403	0.89[ASN][1000 genomes]
rs7935547	0.89[ASN][1000 genomes]
rs7938656	0.89[ASN][1000 genomes]
rs7940956	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7941972	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832287	chr11:121575379-121722735	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:121671800-121680800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr11:121672200-121679600	Weak transcription	Colon Smooth Muscle	Colon
3	chr11:121673800-121679400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr11:121674000-121678800	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr11:121674200-121678400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
6	chr11:121674200-121679000	Weak transcription	H1 Cell Line	embryonic stem cell
7	chr11:121674400-121678000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
8	chr11:121674400-121678600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
9	chr11:121674400-121678800	Weak transcription	HUES6 Cell Line	embryonic stem cell
10	chr11:121674400-121678800	Weak transcription	HUES64 Cell Line	embryonic stem cell
11	chr11:121674400-121679200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
12	chr11:121674400-121679600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr11:121675200-121680400	Weak transcription	Fetal Stomach	stomach

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