Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10219211	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10502256	0.94[ASN][1000 genomes]
rs11218408	0.86[AMR][1000 genomes]
rs11218409	0.89[ASN][1000 genomes]
rs11218414	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11218416	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11218435	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11218439	1.00[ASN][1000 genomes]
rs12273557	1.00[ASN][1000 genomes]
rs12276466	0.89[ASN][1000 genomes]
rs12277681	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12277948	0.94[ASN][1000 genomes]
rs12282527	0.94[ASN][1000 genomes]
rs12287945	1.00[ASN][1000 genomes]
rs12290988	0.94[ASN][1000 genomes]
rs1789763	0.94[ASN][1000 genomes]
rs28378150	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs543959	0.94[ASN][1000 genomes]
rs61903403	1.00[ASN][1000 genomes]
rs7935547	1.00[ASN][1000 genomes]
rs7938656	1.00[ASN][1000 genomes]
rs7940956	0.94[ASN][1000 genomes]
rs7941972	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832287	chr11:121575379-121722735	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:121711800-121714000	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr11:121713000-121714000	Weak transcription	Brain Substantia Nigra	brain
3	chr11:121713000-121714800	Weak transcription	Brain Anterior Caudate	brain
4	chr11:121713000-121715200	Weak transcription	Brain Hippocampus Middle	brain
5	chr11:121713000-121715200	Weak transcription	NHLF	lung
6	chr11:121713200-121714600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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