Variant report

Variant	rs11218414
Chromosome Location	chr11:121712711-121712712
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10219211	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10502256	0.94[ASN][1000 genomes]
rs11218408	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11218409	0.89[ASN][1000 genomes]
rs11218415	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11218416	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11218435	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11218439	1.00[ASN][1000 genomes]
rs12273557	1.00[ASN][1000 genomes]
rs12276466	0.89[ASN][1000 genomes]
rs12277681	0.80[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12277948	0.94[ASN][1000 genomes]
rs12282527	0.94[ASN][1000 genomes]
rs12287945	1.00[ASN][1000 genomes]
rs12290988	0.94[ASN][1000 genomes]
rs1789763	0.94[ASN][1000 genomes]
rs28378150	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs543959	0.94[ASN][1000 genomes]
rs61903403	1.00[ASN][1000 genomes]
rs7935547	1.00[ASN][1000 genomes]
rs7938656	1.00[ASN][1000 genomes]
rs7940956	0.94[ASN][1000 genomes]
rs7941972	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832287	chr11:121575379-121722735	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:35 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:121709400-121713400	Enhancers	NHDF-Ad	bronchial
2	chr11:121710200-121713400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr11:121711400-121713200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr11:121711400-121713400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr11:121711600-121713000	Enhancers	HSMMtube	muscle
6	chr11:121711800-121712800	Enhancers	Breast Myoepithelial Primary Cells	Breast
7	chr11:121711800-121713400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr11:121711800-121714000	Enhancers	Cortex derived primary cultured neurospheres	brain
9	chr11:121712000-121712800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr11:121712000-121712800	Enhancers	Fetal Muscle Leg	muscle
11	chr11:121712000-121713000	Enhancers	Ovary	ovary
12	chr11:121712000-121713000	Enhancers	HUVEC	blood vessel
13	chr11:121712000-121713000	Enhancers	NHLF	lung
14	chr11:121712000-121713400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr11:121712200-121713000	Enhancers	Muscle Satellite Cultured Cells	--
16	chr11:121712200-121713000	Flanking Active TSS	NH-A	brain
17	chr11:121712200-121713200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr11:121712200-121713200	Enhancers	HUES48 Cell Line	embryonic stem cell
19	chr11:121712200-121713200	Enhancers	HUES64 Cell Line	embryonic stem cell
20	chr11:121712400-121712800	Enhancers	ES-I3 Cell Line	embryonic stem cell
21	chr11:121712400-121712800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
22	chr11:121712400-121712800	Enhancers	Fetal Lung	lung
23	chr11:121712400-121713000	Enhancers	iPS-15b Cell Line	embryonic stem cell
24	chr11:121712400-121713000	Enhancers	Brain Anterior Caudate	brain
25	chr11:121712400-121713000	Enhancers	Fetal Stomach	stomach
26	chr11:121712400-121713000	Enhancers	HSMM	muscle
27	chr11:121712400-121713000	Flanking Active TSS	Osteobl	bone
28	chr11:121712400-121713200	Enhancers	iPS-18 Cell Line	embryonic stem cell
29	chr11:121712400-121713200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
30	chr11:121712400-121713400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
31	chr11:121712400-121713400	Enhancers	HUES6 Cell Line	embryonic stem cell
32	chr11:121712400-121713400	Enhancers	iPS-20b Cell Line	embryonic stem cell
33	chr11:121712600-121712800	Enhancers	Brain Inferior Temporal Lobe	brain
34	chr11:121712600-121712800	Enhancers	Brain Substantia Nigra	brain
35	chr11:121712600-121713000	Enhancers	Brain Hippocampus Middle	brain

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