The 2.0 version of rSNPBase

Variant report

Variant rs12291665
Chromosome Location chr11:73648524-73648525
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:73633200-73652400 Weak transcription Small Intestine intestine
2 chr11:73639000-73653000 Weak transcription K562 blood
3 chr11:73639200-73650000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr11:73639400-73653200 Weak transcription Gastric stomach
5 chr11:73639400-73668000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr11:73639600-73648600 Weak transcription Hela-S3 cervix
7 chr11:73639600-73648800 Weak transcription Dnd41 blood
8 chr11:73639600-73649600 Weak transcription NH-A brain
9 chr11:73639600-73649800 Weak transcription HMEC breast
10 chr11:73640000-73649800 Weak transcription Esophagus oesophagus
11 chr11:73640400-73655000 Weak transcription Brain Germinal Matrix brain
12 chr11:73640400-73659200 Weak transcription HepG2 liver
13 chr11:73640800-73649400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr11:73640800-73652200 Weak transcription Fetal Brain Female brain
15 chr11:73640800-73667000 Weak transcription Pancreas Pancrea
16 chr11:73641000-73648600 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr11:73641400-73672200 Weak transcription Placenta Amnion Placenta Amnion
18 chr11:73642600-73652200 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr11:73642600-73655600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr11:73642600-73656200 Weak transcription Brain Inferior Temporal Lobe brain
21 chr11:73642800-73653000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr11:73643800-73649200 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr11:73644000-73649000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr11:73644000-73649600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr11:73644000-73650000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr11:73644000-73653000 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr11:73644200-73649800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr11:73644200-73652200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr11:73645200-73648800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr11:73645400-73655200 Weak transcription Brain Anterior Caudate brain
31 chr11:73645600-73649400 Weak transcription Thymus Thymus
32 chr11:73645600-73649600 Weak transcription HSMMtube muscle
33 chr11:73645600-73649800 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr11:73645600-73655000 Weak transcription Adipose Nuclei Adipose
35 chr11:73645600-73655600 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr11:73645800-73655400 Weak transcription Brain Cingulate Gyrus brain
37 chr11:73646200-73649200 Weak transcription Duodenum Mucosa Duodenum
38 chr11:73646200-73649200 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr11:73646200-73649600 Weak transcription HSMM muscle
40 chr11:73646200-73650400 Weak transcription Ovary ovary
41 chr11:73646200-73653600 Weak transcription Left Ventricle heart
42 chr11:73646200-73654400 Weak transcription Primary T helper cells fromperipheralblood blood
43 chr11:73646200-73655000 Weak transcription Brain Hippocampus Middle brain
44 chr11:73646400-73648600 Weak transcription Primary T cells fromperipheralblood blood
45 chr11:73646400-73648600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr11:73646400-73648800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr11:73646400-73649600 Weak transcription Primary T cells from cord blood blood
48 chr11:73646400-73653600 Weak transcription Liver Liver
49 chr11:73648000-73649000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr11:73648000-73649200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015