Variant report

Variant	rs12300500
Chromosome Location	chr12:26320563-26320564
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs1077584	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11048419	0.86[AFR][1000 genomes]
rs11048420	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12318480	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12818979	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12822290	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12827659	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1383112	0.84[GIH][hapmap]
rs1471506	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1480037	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1531649	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs3809140	0.84[GIH][hapmap]
rs4963968	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56686254	0.98[AFR][1000 genomes]
rs7134610	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7304527	0.84[AFR][1000 genomes]
rs7309947	0.92[AFR][1000 genomes]
rs7316143	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7979429	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:26319000-26321400	Weak transcription	Brain Substantia Nigra	brain
2	chr12:26319000-26325200	Weak transcription	Brain Anterior Caudate	brain
3	chr12:26319400-26321000	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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