Variant report

Variant	rs12301542
Chromosome Location	chr12:103685597-103685598
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10778228	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap]
rs10778231	0.95[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10778232	0.90[CEU][hapmap];0.88[EUR][1000 genomes]
rs10778236	0.90[CEU][hapmap];0.88[EUR][1000 genomes]
rs10778237	0.95[CEU][hapmap];0.82[EUR][1000 genomes]
rs10778238	0.82[EUR][1000 genomes]
rs10860977	0.95[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10860990	0.95[CEU][hapmap]
rs11111540	0.90[CEU][hapmap]
rs1879621	0.90[CEU][hapmap];0.84[EUR][1000 genomes]
rs1996749	0.84[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2374052	0.94[CEU][hapmap];0.82[EUR][1000 genomes]
rs2374060	0.95[CEU][hapmap];0.81[EUR][1000 genomes]
rs2374061	0.84[CEU][hapmap]
rs4764732	0.83[EUR][1000 genomes]
rs4764949	0.95[CEU][hapmap];0.84[CHB][hapmap];0.93[JPT][hapmap];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4764952	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4764955	0.90[CEU][hapmap];0.84[EUR][1000 genomes]
rs6539066	0.89[CEU][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6539069	0.95[CEU][hapmap];0.81[EUR][1000 genomes]
rs6539070	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs7137989	0.95[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7969597	0.87[EUR][1000 genomes]
rs7970479	0.84[EUR][1000 genomes]
rs7970531	0.95[CEU][hapmap];0.82[EUR][1000 genomes]
rs7971321	0.90[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs8181626	0.84[EUR][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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