Variant report

Variant rs12335853
Chromosome Location chr9:592857-592858
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:28 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:549800-593800 Weak transcription Lung lung
2 chr9:583000-594400 Weak transcription Fetal Kidney kidney
3 chr9:589400-593400 Enhancers A549 lung
4 chr9:589800-593000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr9:590000-625000 Weak transcription Aorta Aorta
6 chr9:590200-593000 Enhancers Breast Myoepithelial Primary Cells Breast
7 chr9:590200-600200 Weak transcription Placenta Placenta
8 chr9:590200-621600 Weak transcription Psoas Muscle Psoas
9 chr9:590400-593000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr9:591400-593000 Enhancers Brain Hippocampus Middle brain
11 chr9:591400-593000 Enhancers Right Atrium heart
12 chr9:591400-593000 Enhancers Stomach Mucosa stomach
13 chr9:591400-594200 Enhancers iPS-18 Cell Line embryonic stem cell
14 chr9:591400-601600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr9:591600-596400 Weak transcription Brain Cingulate Gyrus brain
16 chr9:591800-596200 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr9:592200-594600 Enhancers Fetal Heart heart
18 chr9:592400-594600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr9:592400-596000 Weak transcription Brain Angular Gyrus brain
20 chr9:592600-593000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr9:592600-594000 Weak transcription Left Ventricle heart
22 chr9:592600-594200 Enhancers Right Ventricle heart
23 chr9:592600-596400 Weak transcription Brain Inferior Temporal Lobe brain
24 chr9:592600-596400 Weak transcription Brain Substantia Nigra brain
25 chr9:592600-607200 Weak transcription Pancreas Pancrea
26 chr9:592600-614400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr9:592800-593000 Enhancers Esophagus oesophagus
28 chr9:592800-602600 Weak transcription NHEK skin

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