The 2.0 version of rSNPBase

Variant report

Variant rs12345417
Chromosome Location chr9:26858559-26858560
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:26822200-26889400 Weak transcription Psoas Muscle Psoas
2 chr9:26830200-26865400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr9:26832200-26866800 Weak transcription Gastric stomach
4 chr9:26832200-26878400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr9:26834000-26882400 Weak transcription HUVEC blood vessel
6 chr9:26834200-26858800 Weak transcription Fetal Adrenal Gland Adrenal Gland
7 chr9:26834200-26859000 Weak transcription Fetal Kidney kidney
8 chr9:26834200-26870600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr9:26834200-26878400 Weak transcription Brain Angular Gyrus brain
10 chr9:26834200-26878600 Weak transcription Spleen Spleen
11 chr9:26834200-26880200 Weak transcription Lung lung
12 chr9:26834200-26880200 Weak transcription NHEK skin
13 chr9:26834200-26882200 Weak transcription HMEC breast
14 chr9:26834200-26888200 Weak transcription Muscle Satellite Cultured Cells --
15 chr9:26834200-26891200 Weak transcription NHDF-Ad bronchial
16 chr9:26836400-26859000 Weak transcription Fetal Brain Male brain
17 chr9:26836400-26879600 Weak transcription Esophagus oesophagus
18 chr9:26836600-26891400 Weak transcription Brain Substantia Nigra brain
19 chr9:26838000-26878200 Weak transcription Brain Germinal Matrix brain
20 chr9:26838200-26858800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr9:26838200-26879600 Weak transcription Pancreas Pancrea
22 chr9:26839000-26858600 Weak transcription Small Intestine intestine
23 chr9:26840600-26859000 Weak transcription Fetal Brain Female brain
24 chr9:26840600-26882400 Weak transcription Brain Cingulate Gyrus brain
25 chr9:26840800-26865400 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr9:26840800-26879800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr9:26841200-26879800 Weak transcription Colonic Mucosa Colon
28 chr9:26841600-26862600 Weak transcription Primary T killer naive cells fromperipheralblood blood
29 chr9:26842600-26859000 Weak transcription Colon Smooth Muscle Colon
30 chr9:26842600-26882200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr9:26842800-26879600 Weak transcription Thymus Thymus
32 chr9:26843200-26878400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr9:26846000-26861800 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr9:26846400-26870600 Weak transcription Fetal Stomach stomach
35 chr9:26846600-26881600 Weak transcription Primary neutrophils fromperipheralblood blood
36 chr9:26847000-26883000 Weak transcription K562 blood
37 chr9:26847400-26863200 Strong transcription HUES64 Cell Line embryonic stem cell
38 chr9:26848000-26859600 Strong transcription Primary B cells from peripheral blood blood
39 chr9:26849000-26860000 Strong transcription Primary B cells from cord blood blood
40 chr9:26849000-26860800 Strong transcription Liver Liver
41 chr9:26851000-26859600 Strong transcription Fetal Intestine Large intestine
42 chr9:26851400-26878600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr9:26851400-26888000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
44 chr9:26851800-26888600 Weak transcription Fetal Heart heart
45 chr9:26851800-26891600 Weak transcription Stomach Mucosa stomach
46 chr9:26852400-26888000 Weak transcription NHLF lung
47 chr9:26852600-26860800 Strong transcription HUES48 Cell Line embryonic stem cell
48 chr9:26852600-26861200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
49 chr9:26852600-26861400 Strong transcription Duodenum Mucosa Duodenum
50 chr9:26852600-26861800 Strong transcription Dnd41 blood

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Last update: Aug 31, 2015