Variant report

Variant	rs12407488
Chromosome Location	chr1:159193187-159193188
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10489849	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11265150	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11265152	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12063098	0.95[EUR][1000 genomes]
rs12069029	0.94[EUR][1000 genomes]
rs12095174	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12410844	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17666424	0.90[AMR][1000 genomes]
rs3027076	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs34029634	0.92[EUR][1000 genomes]
rs34217855	0.81[AMR][1000 genomes]
rs34683667	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs35113846	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs35610895	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6687584	0.93[EUR][1000 genomes]
rs6687589	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72711391	0.81[AMR][1000 genomes]
rs7533790	0.93[EUR][1000 genomes]
rs7533795	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:159190400-159193400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr1:159193000-159199200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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