Variant report

No.	Distal block	Cell Line	Cell type
1	chr10:44806565..44809195-chr10:45358624..45361285,2	MCF-7	breast:
2	chr10:44807407..44809673-chr10:44812820..44814323,2	K562	blood:
3	chr10:44803131..44805598-chr10:44807821..44810324,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1111259	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11239000	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12240817	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12246602	0.80[AMR][1000 genomes]
rs12265086	0.86[AMR][1000 genomes]
rs12412586	0.80[EUR][1000 genomes]
rs2118162	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2146807	0.86[AMR][1000 genomes]
rs2505737	0.83[ASN][1000 genomes]
rs2505739	0.83[ASN][1000 genomes]
rs266109	0.81[EUR][1000 genomes]
rs3740084	0.82[AMR][1000 genomes]
rs56179443	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs61856383	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61856384	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61856385	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72790834	0.83[EUR][1000 genomes]
rs7894693	0.95[AFR][1000 genomes];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7913265	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7914042	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs977754	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1038511	chr10:44596885-44870030	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	esv3519047	chr10:44807996-44811694	Enhancers Bivalent Enhancer Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44806600-44810600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr10:44806600-44820800	Weak transcription	Right Atrium	heart
3	chr10:44807000-44808600	Enhancers	GM12878-XiMat	blood
4	chr10:44807000-44809400	Weak transcription	Brain Germinal Matrix	brain
5	chr10:44807200-44809600	Weak transcription	Right Ventricle	heart
6	chr10:44807200-44822200	Weak transcription	Left Ventricle	heart
7	chr10:44807400-44809200	Weak transcription	Colon Smooth Muscle	Colon
8	chr10:44807400-44809400	Weak transcription	Fetal Heart	heart
9	chr10:44807600-44820800	Weak transcription	Skeletal Muscle Male	skeletal muscle
10	chr10:44808000-44809000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr10:44808000-44810600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr10:44808000-44820000	Weak transcription	Skeletal Muscle Female	skeletal muscle
13	chr10:44808200-44809200	Weak transcription	Fetal Muscle Leg	muscle

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