Variant report

Variant	rs12419150
Chromosome Location	chr11:100800925-100800926
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	TEAD4	chr11:100800849-100801367	SK-N-SH	brain:	n/a	n/a
2	SMC3	chr11:100800806-100801334	GM12878	blood:	n/a	chr11:100801099-100801113
3	RAD21	chr11:100800792-100801305	ECC-1	luminal epithelium:	n/a	chr11:100801095-100801114
4	RAD21	chr11:100800806-100801303	GM12878	blood:	n/a	chr11:100801095-100801114
5	CTCF	chr11:100800900-100801225	SK-N-SH_RA	brain:	n/a	chr11:100801097-100801115 chr11:100801092-100801113
6	RAD21	chr11:100800887-100801261	GM12878	blood:	n/a	chr11:100801095-100801114
7	TEAD4	chr11:100800794-100801389	HepG2	liver:	n/a	n/a
8	TEAD4	chr11:100800872-100801298	K562	blood:	n/a	n/a
9	RAD21	chr11:100800783-100801301	IMR90	lung:	n/a	chr11:100801095-100801114
10	RAD21	chr11:100800810-100801222	A549	lung:	n/a	chr11:100801095-100801114
11	MYC	chr11:100800923-100801268	MCF10A-Er-Src	breast:	n/a	n/a
12	TEAD4	chr11:100800810-100801318	ECC-1	luminal epithelium:	n/a	n/a
13	RAD21	chr11:100800814-100801382	A549	lung:	n/a	chr11:100801095-100801114
14	TEAD4	chr11:100800897-100801328	A549	lung:	n/a	n/a
15	CTCF	chr11:100800884-100801374	MCF-7	breast:	n/a	chr11:100801097-100801115 chr11:100801092-100801113
16	CTCF	chr11:100800880-100801030	GM12866	blood:	n/a	n/a
17	CTCF	chr11:100800881-100801354	K562	blood:	n/a	chr11:100801097-100801115 chr11:100801092-100801113
18	SMC3	chr11:100800830-100801292	Hela-S3	cervix:	n/a	chr11:100801099-100801113
19	CEBPB	chr11:100800918-100801330	A549	lung:	n/a	chr11:100801116-100801127 chr11:100800950-100800962 chr11:100801121-100801134
20	RAD21	chr11:100800807-100801276	HCT-116	colon:	n/a	chr11:100801095-100801114
21	RAD21	chr11:100800870-100801278	GM12878	blood:	n/a	chr11:100801095-100801114
22	RAD21	chr11:100800895-100801242	SK-N-SH_RA	brain:	n/a	chr11:100801095-100801114
23	RAD21	chr11:100800860-100801306	MCF-7	breast:	n/a	chr11:100801095-100801114
24	CTCF	chr11:100800880-100801030	A549	lung:	n/a	n/a
25	TEAD4	chr11:100800819-100801349	HCT-116	colon:	n/a	n/a
26	TEAD4	chr11:100800877-100801396	HCT-116	colon:	n/a	n/a
27	TEAD4	chr11:100800865-100801244	ECC-1	luminal epithelium:	n/a	n/a
28	RAD21	chr11:100800854-100801315	Hela-S3	cervix:	n/a	chr11:100801095-100801114
29	CTCF	chr11:100800920-100801070	HAc	cerebellar:	n/a	n/a
30	RAD21	chr11:100800912-100801259	SK-N-SH_RA	brain:	n/a	chr11:100801095-100801114
31	RAD21	chr11:100800862-100801273	HepG2	liver:	n/a	chr11:100801095-100801114
32	RAD21	chr11:100800659-100801502	SK-N-SH	brain:	n/a	chr11:100801095-100801114
33	RAD21	chr11:100800820-100801256	HepG2	liver:	n/a	chr11:100801095-100801114
34	CTCF	chr11:100800896-100801278	HepG2	liver:	n/a	chr11:100801097-100801115 chr11:100801092-100801113
35	RAD21	chr11:100800804-100801318	H1-hESC	embryonic stem cell:	n/a	chr11:100801095-100801114
36	TEAD4	chr11:100800855-100801301	K562	blood:	n/a	n/a
37	CTCF	chr11:100800889-100801328	IMR90	lung:	n/a	chr11:100801097-100801115 chr11:100801092-100801113
38	CTCF	chr11:100800712-100801522	SK-N-SH	brain:	n/a	chr11:100801097-100801115 chr11:100801092-100801113
39	SMC3	chr11:100800907-100801207	K562	blood:	n/a	chr11:100801099-100801113
40	RAD21	chr11:100800827-100801294	H1-hESC	embryonic stem cell:	n/a	chr11:100801095-100801114
41	CTCF	chr11:100800858-100801489	GM12878	blood:	n/a	chr11:100801097-100801115 chr11:100801092-100801113
42	RAD21	chr11:100800864-100801280	H1-hESC	embryonic stem cell:	n/a	chr11:100801095-100801114
43	TEAD4	chr11:100800900-100801308	A549	lung:	n/a	n/a
44	RAD21	chr11:100800841-100801363	ECC-1	luminal epithelium:	n/a	chr11:100801095-100801114
45	CEBPB	chr11:100800920-100801288	Hela-S3	cervix:	n/a	chr11:100801116-100801127 chr11:100800950-100800962 chr11:100801121-100801134
46	CTCF	chr11:100800847-100801223	A549	lung:	n/a	chr11:100801097-100801115 chr11:100801092-100801113
47	RAD21	chr11:100800782-100801397	HCT-116	colon:	n/a	chr11:100801095-100801114
48	TEAD4	chr11:100800852-100801330	H1-hESC	embryonic stem cell:	n/a	n/a
49	RAD21	chr11:100800897-100801295	K562	blood:	n/a	chr11:100801095-100801114
50	CTCF	chr11:100800699-100801634	A549	lung:	n/a	chr11:100801097-100801115 chr11:100801092-100801113

No.	Distal block	Cell Line	Cell type
1	chr11:100790778..100793408-chr11:100799342..100801098,2	MCF-7	breast:
2	chr11:100556941..100559649-chr11:100798656..100801476,2	MCF-7	breast:
3	chr11:100446854..100447800-chr11:100800624..100801423,2	K562	blood:
4	chr11:100446949..100447784-chr11:100800696..100801382,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000238388	TF binding region
ENSG00000165895	Chromatin interaction
ENSG00000248027	Chromatin interaction

Extended variants
information (count: 119 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:117)

rs_ID	r²[population]
rs10501968	1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[JPT][hapmap];0.94[ASN][1000 genomes]
rs10791431	0.95[ASN][1000 genomes]
rs10791440	1.00[CHB][hapmap]
rs11224507	0.90[ASN][1000 genomes]
rs11224508	0.87[ASN][1000 genomes]
rs11224509	0.91[ASN][1000 genomes]
rs11224526	1.00[CHB][hapmap];0.93[JPT][hapmap];0.96[ASN][1000 genomes]
rs11224530	1.00[CHB][hapmap];0.93[JPT][hapmap];0.96[ASN][1000 genomes]
rs1145434	1.00[ASN][1000 genomes]
rs11534487	0.90[ASN][1000 genomes]
rs12416898	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12417055	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12417065	0.95[ASN][1000 genomes]
rs12417295	1.00[CEU][hapmap];1.00[GIH][hapmap];0.84[MEX][hapmap];0.87[MKK][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs12417366	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12417367	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12417750	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap]
rs12417981	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12418060	0.89[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs12418330	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.93[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12418344	1.00[EUR][1000 genomes]
rs12418450	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.93[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12418561	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12418769	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12419214	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12419257	0.94[CHB][hapmap];0.92[JPT][hapmap];0.94[ASN][1000 genomes]
rs12420084	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12420453	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12420466	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12420698	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.93[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.83[TSI][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12420922	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12421386	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.93[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12421655	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12422140	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17095808	1.00[CHB][hapmap];0.93[JPT][hapmap];1.00[ASN][1000 genomes]
rs17095820	1.00[CHB][hapmap];0.93[JPT][hapmap];0.99[ASN][1000 genomes]
rs17095829	1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[JPT][hapmap];0.95[ASN][1000 genomes]
rs1893683	0.94[ASN][1000 genomes]
rs1940221	0.96[ASN][1000 genomes]
rs1943499	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1943500	0.94[ASN][1000 genomes]
rs1944432	1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[JPT][hapmap];0.92[ASN][1000 genomes]
rs1944433	1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[JPT][hapmap];0.96[ASN][1000 genomes]
rs1944434	1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[JPT][hapmap];0.96[ASN][1000 genomes]
rs2155444	1.00[CHB][hapmap];0.93[JPT][hapmap];0.94[ASN][1000 genomes]
rs2155445	1.00[CHB][hapmap];0.93[JPT][hapmap];0.94[ASN][1000 genomes]
rs2165664	0.92[ASN][1000 genomes]
rs2165665	0.89[ASN][1000 genomes]
rs2186784	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2186785	0.88[CHB][hapmap];0.94[ASN][1000 genomes]
rs2186786	0.94[CHB][hapmap];0.92[JPT][hapmap];0.94[ASN][1000 genomes]
rs2277274	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2277275	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.93[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2407822	0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2407823	0.94[ASN][1000 genomes]
rs2407825	0.94[ASN][1000 genomes]
rs28492796	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2897779	0.94[ASN][1000 genomes]
rs3843607	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3886266	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4587692	0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs473765	1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[JPT][hapmap];0.91[ASN][1000 genomes]
rs475432	1.00[CHB][hapmap];0.92[JPT][hapmap];0.94[ASN][1000 genomes]
rs4754708	0.94[ASN][1000 genomes]
rs4754709	0.94[ASN][1000 genomes]
rs479135	1.00[CHB][hapmap];0.86[JPT][hapmap];0.94[ASN][1000 genomes]
rs480145	0.94[ASN][1000 genomes]
rs485269	0.83[CHB][hapmap]
rs497234	1.00[CHB][hapmap];0.93[JPT][hapmap];0.94[ASN][1000 genomes]
rs501831	0.94[ASN][1000 genomes]
rs505458	1.00[CHB][hapmap]
rs507858	0.94[CHB][hapmap];0.97[CHD][hapmap];0.93[JPT][hapmap];0.89[ASN][1000 genomes]
rs515868	1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[JPT][hapmap];0.94[ASN][1000 genomes]
rs516873	1.00[CHB][hapmap];0.92[JPT][hapmap];0.91[ASN][1000 genomes]
rs527433	0.96[ASN][1000 genomes]
rs527689	0.96[ASN][1000 genomes]
rs533384	1.00[CHB][hapmap]
rs539648	1.00[ASN][1000 genomes]
rs540866	1.00[CHB][hapmap];0.97[CHD][hapmap];0.86[JPT][hapmap];0.91[ASN][1000 genomes]
rs543146	1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[JPT][hapmap];0.93[ASN][1000 genomes]
rs549510	1.00[CHB][hapmap];0.92[JPT][hapmap];0.94[ASN][1000 genomes]
rs552490	1.00[CHB][hapmap];0.94[CHD][hapmap];0.93[JPT][hapmap];0.94[ASN][1000 genomes]
rs554077	0.94[ASN][1000 genomes]
rs555825	1.00[CHB][hapmap];0.93[JPT][hapmap];0.94[ASN][1000 genomes]
rs55745131	1.00[ASN][1000 genomes]
rs56320976	0.94[ASN][1000 genomes]
rs563460	1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[JPT][hapmap];0.91[ASN][1000 genomes]
rs568618	1.00[CHB][hapmap];0.93[JPT][hapmap];0.91[ASN][1000 genomes]
rs57502383	0.96[ASN][1000 genomes]
rs575734	1.00[CHB][hapmap]
rs576472	1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[JPT][hapmap];0.96[ASN][1000 genomes]
rs583415	1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[JPT][hapmap];0.96[ASN][1000 genomes]
rs601016	0.94[ASN][1000 genomes]
rs60423120	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs60612076	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs61995873	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs623072	0.96[ASN][1000 genomes]
rs626529	0.99[ASN][1000 genomes]
rs634968	1.00[CHB][hapmap];0.93[JPT][hapmap];0.94[ASN][1000 genomes]
rs640326	1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[JPT][hapmap];0.99[ASN][1000 genomes]
rs647256	0.96[ASN][1000 genomes]
rs658497	1.00[CHB][hapmap];0.93[JPT][hapmap];0.91[ASN][1000 genomes]
rs6590829	1.00[CHB][hapmap];0.95[CHD][hapmap];0.93[JPT][hapmap];0.91[ASN][1000 genomes]
rs6590830	0.91[ASN][1000 genomes]
rs6590831	1.00[CHB][hapmap];0.93[JPT][hapmap];0.91[ASN][1000 genomes]
rs6590832	0.87[ASN][1000 genomes]
rs6590833	0.91[ASN][1000 genomes]
rs661973	1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[JPT][hapmap];0.93[ASN][1000 genomes]
rs662453	0.93[ASN][1000 genomes]
rs668513	1.00[CHB][hapmap];0.93[JPT][hapmap];1.00[ASN][1000 genomes]
rs688146	1.00[CHB][hapmap];0.93[JPT][hapmap];0.89[ASN][1000 genomes]
rs7110858	0.91[ASN][1000 genomes]
rs7114062	0.94[CHB][hapmap];0.85[JPT][hapmap];0.99[ASN][1000 genomes]
rs7130581	0.91[ASN][1000 genomes]
rs7130586	1.00[CHB][hapmap];0.93[JPT][hapmap];0.91[ASN][1000 genomes]
rs7933033	1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[JPT][hapmap];0.91[ASN][1000 genomes]
rs7950572	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1048356	chr11:100713096-101058995	Strong transcription Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	nsv541154	chr11:100713096-101058995	Flanking Bivalent TSS/Enh Weak transcription Enhancers Bivalent/Poised TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:52 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:100772000-100831400	Weak transcription	Rectal Mucosa Donor 31	rectum
2	chr11:100773800-100809800	Weak transcription	Left Ventricle	heart
3	chr11:100774800-100812800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr11:100784000-100808800	Weak transcription	Primary B cells from cord blood	blood
5	chr11:100785400-100838400	Weak transcription	Fetal Intestine Small	intestine
6	chr11:100786800-100806800	Weak transcription	Placenta	Placenta
7	chr11:100790000-100803200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
8	chr11:100790200-100812600	Weak transcription	Stomach Mucosa	stomach
9	chr11:100790400-100806600	Weak transcription	Sigmoid Colon	Sigmoid Colon
10	chr11:100793400-100807000	Weak transcription	Liver	Liver
11	chr11:100794200-100803000	Weak transcription	HUES48 Cell Line	embryonic stem cell
12	chr11:100794200-100807000	Weak transcription	Fetal Muscle Leg	muscle
13	chr11:100794400-100812800	Weak transcription	Fetal Stomach	stomach
14	chr11:100795600-100807400	Weak transcription	Fetal Muscle Trunk	muscle
15	chr11:100797600-100811800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr11:100798400-100801000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr11:100798400-100801000	Enhancers	Muscle Satellite Cultured Cells	--
18	chr11:100798400-100801000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr11:100798600-100801000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr11:100798600-100801000	Enhancers	NHEK	skin
21	chr11:100798600-100807600	Weak transcription	Ovary	ovary
22	chr11:100798600-100811600	Weak transcription	Fetal Lung	lung
23	chr11:100798600-100812800	Weak transcription	Brain Hippocampus Middle	brain
24	chr11:100798600-100826600	Weak transcription	HUES6 Cell Line	embryonic stem cell
25	chr11:100798600-100828200	Weak transcription	Gastric	stomach
26	chr11:100798800-100807000	Weak transcription	HUES64 Cell Line	embryonic stem cell
27	chr11:100798800-100811400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
28	chr11:100798800-100832200	Weak transcription	Duodenum Smooth Muscle	Duodenum
29	chr11:100799000-100801000	Enhancers	HMEC	breast
30	chr11:100799000-100801400	Enhancers	NH-A	brain
31	chr11:100799200-100801000	Enhancers	NHDF-Ad	bronchial
32	chr11:100799200-100804600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
33	chr11:100799200-100812800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
34	chr11:100799200-100812800	Weak transcription	Cortex derived primary cultured neurospheres	brain
35	chr11:100799400-100801000	Enhancers	HSMM	muscle
36	chr11:100800000-100801000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
37	chr11:100800000-100801000	Enhancers	Fetal Heart	heart
38	chr11:100800000-100801000	Enhancers	HSMMtube	muscle
39	chr11:100800000-100801400	Enhancers	A549	lung
40	chr11:100800200-100801000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
41	chr11:100800200-100801000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
42	chr11:100800200-100801000	Flanking Active TSS	GM12878-XiMat	blood
43	chr11:100800200-100846600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
44	chr11:100800600-100801000	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
45	chr11:100800600-100801000	Flanking Active TSS	NHLF	lung
46	chr11:100800600-100801000	Flanking Active TSS	Osteobl	bone
47	chr11:100800600-100801200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
48	chr11:100800800-100801000	Enhancers	ES-I3 Cell Line	embryonic stem cell
49	chr11:100800800-100801000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
50	chr11:100800800-100801000	Enhancers	Brain Anterior Caudate	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links