The 2.0 version of rSNPBase

Variant report

Variant rs2277274
Chromosome Location chr11:100847484-100847485
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:100810000-100852200 Weak transcription Small Intestine intestine
2 chr11:100810600-100848400 Weak transcription Rectal Smooth Muscle rectum
3 chr11:100813000-100848600 Weak transcription A549 lung
4 chr11:100828800-100849400 Weak transcription NHLF lung
5 chr11:100829000-100849400 Weak transcription HMEC breast
6 chr11:100829600-100849400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr11:100830000-100847600 Weak transcription Psoas Muscle Psoas
8 chr11:100830600-100858200 Weak transcription Colonic Mucosa Colon
9 chr11:100832200-100849600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr11:100834400-100851600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr11:100840400-100849200 Weak transcription Dnd41 blood
12 chr11:100841400-100850000 Weak transcription Pancreas Pancrea
13 chr11:100841600-100852200 Weak transcription Spleen Spleen
14 chr11:100841800-100849800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr11:100841800-100852200 Weak transcription Esophagus oesophagus
16 chr11:100844000-100860200 Strong transcription Placenta Placenta
17 chr11:100844200-100848400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr11:100844400-100848800 Strong transcription HSMM muscle
19 chr11:100844400-100850600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr11:100844600-100848200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr11:100844600-100848200 Strong transcription Fetal Muscle Trunk muscle
22 chr11:100844600-100848200 Strong transcription Sigmoid Colon Sigmoid Colon
23 chr11:100844600-100848400 Strong transcription Rectal Mucosa Donor 29 rectum
24 chr11:100844600-100848600 Strong transcription Breast Myoepithelial Primary Cells Breast
25 chr11:100844600-100848800 Strong transcription Duodenum Mucosa Duodenum
26 chr11:100844600-100849000 Strong transcription Stomach Smooth Muscle stomach
27 chr11:100844600-100849800 Strong transcription Rectal Mucosa Donor 31 rectum
28 chr11:100844600-100850000 Strong transcription Adipose Nuclei Adipose
29 chr11:100844600-100850400 Strong transcription Liver Liver
30 chr11:100844800-100849800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr11:100844800-100863000 Weak transcription Brain Anterior Caudate brain
32 chr11:100845000-100848800 Strong transcription Primary B cells from cord blood blood
33 chr11:100845200-100848400 Strong transcription Fetal Adrenal Gland Adrenal Gland
34 chr11:100845200-100848800 Strong transcription Duodenum Smooth Muscle Duodenum
35 chr11:100845400-100848000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr11:100845400-100848600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr11:100845400-100849000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr11:100845400-100849200 Weak transcription Lung lung
39 chr11:100845400-100850000 Weak transcription NHDF-Ad bronchial
40 chr11:100845600-100849200 Strong transcription Fetal Lung lung
41 chr11:100845800-100848200 Strong transcription Cortex derived primary cultured neurospheres brain
42 chr11:100845800-100850800 Weak transcription K562 blood
43 chr11:100846200-100848600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr11:100846200-100848600 Weak transcription Brain Inferior Temporal Lobe brain
45 chr11:100846200-100848800 Strong transcription NH-A brain
46 chr11:100846200-100857400 Weak transcription Fetal Brain Male brain
47 chr11:100846400-100848200 Strong transcription Fetal Stomach stomach
48 chr11:100846400-100855200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr11:100846600-100847800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr11:100846600-100847800 Strong transcription Right Ventricle heart

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Last update: Aug 31, 2015