The 2.0 version of rSNPBase

Variant report

Variant rs60423120
Chromosome Location chr11:100831923-100831924
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:100785400-100838400 Weak transcription Fetal Intestine Small intestine
2 chr11:100798800-100832200 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr11:100800200-100846600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr11:100800800-100835800 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr11:100801000-100832400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr11:100801000-100835000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr11:100801400-100833800 Weak transcription NH-A brain
8 chr11:100806600-100837200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr11:100806800-100832400 Weak transcription Fetal Intestine Large intestine
10 chr11:100807800-100844600 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr11:100808000-100832200 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr11:100808000-100846600 Weak transcription Ovary ovary
13 chr11:100810000-100852200 Weak transcription Small Intestine intestine
14 chr11:100810400-100845000 Weak transcription Primary B cells from cord blood blood
15 chr11:100810600-100848400 Weak transcription Rectal Smooth Muscle rectum
16 chr11:100812000-100832000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr11:100812000-100841000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr11:100813000-100832400 Weak transcription Fetal Muscle Trunk muscle
19 chr11:100813000-100848600 Weak transcription A549 lung
20 chr11:100813200-100832000 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr11:100813200-100832000 Weak transcription Adipose Nuclei Adipose
22 chr11:100813200-100832000 Weak transcription Fetal Lung lung
23 chr11:100813200-100838800 Weak transcription Stomach Smooth Muscle stomach
24 chr11:100813200-100841400 Weak transcription Fetal Stomach stomach
25 chr11:100813200-100846600 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr11:100813400-100834800 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr11:100813800-100834000 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr11:100814200-100835600 Weak transcription Dnd41 blood
29 chr11:100815400-100832800 Weak transcription HSMM muscle
30 chr11:100816200-100832000 Weak transcription Fetal Muscle Leg muscle
31 chr11:100820200-100832800 Weak transcription HSMMtube muscle
32 chr11:100820400-100841400 Weak transcription Right Ventricle heart
33 chr11:100820400-100847000 Weak transcription Fetal Kidney kidney
34 chr11:100823800-100833600 Weak transcription Primary B cells from peripheral blood blood
35 chr11:100827200-100840200 Weak transcription ES-WA7 Cell Line embryonic stem cell
36 chr11:100827400-100833000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr11:100827400-100846600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
38 chr11:100827600-100835000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr11:100828400-100832200 Weak transcription iPS-20b Cell Line embryonic stem cell
40 chr11:100828400-100845400 Weak transcription iPS-18 Cell Line embryonic stem cell
41 chr11:100828600-100846400 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr11:100828800-100849400 Weak transcription NHLF lung
43 chr11:100829000-100832400 Weak transcription HUES64 Cell Line embryonic stem cell
44 chr11:100829000-100849400 Weak transcription HMEC breast
45 chr11:100829200-100834400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
46 chr11:100829200-100846800 Weak transcription H9 Cell Line embryonic stem cell
47 chr11:100829600-100833800 Weak transcription HUES6 Cell Line embryonic stem cell
48 chr11:100829600-100833800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr11:100829600-100841400 Weak transcription iPS-15b Cell Line embryonic stem cell
50 chr11:100829600-100849400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015