The 2.0 version of rSNPBase

Variant report

Variant rs1246349
Chromosome Location chr1:95437770-95437771
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95422000-95450800 Weak transcription Cortex derived primary cultured neurospheres brain
2 chr1:95428800-95439200 Weak transcription Aorta Aorta
3 chr1:95429000-95439800 Weak transcription Brain Inferior Temporal Lobe brain
4 chr1:95429000-95467600 Weak transcription Stomach Smooth Muscle stomach
5 chr1:95429200-95440200 Weak transcription Fetal Intestine Small intestine
6 chr1:95435800-95438000 Enhancers Placenta Placenta
7 chr1:95436200-95438200 Enhancers Breast Myoepithelial Primary Cells Breast
8 chr1:95436200-95438200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr1:95436200-95438200 Enhancers Fetal Adrenal Gland Adrenal Gland
10 chr1:95436200-95438200 Enhancers HMEC breast
11 chr1:95436200-95438200 Enhancers NHLF lung
12 chr1:95436200-95438200 Enhancers Osteobl bone
13 chr1:95436200-95440000 Enhancers NHDF-Ad bronchial
14 chr1:95436200-95441200 Enhancers HSMM muscle
15 chr1:95436400-95437800 Enhancers Skeletal Muscle Male skeletal muscle
16 chr1:95436400-95437800 Enhancers HepG2 liver
17 chr1:95436400-95438000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
18 chr1:95436400-95438000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr1:95436400-95438000 Enhancers Left Ventricle heart
20 chr1:95436400-95438000 Enhancers Lung lung
21 chr1:95436400-95438000 Enhancers Skeletal Muscle Female skeletal muscle
22 chr1:95436400-95438000 Enhancers A549 lung
23 chr1:95436400-95438000 Enhancers NH-A brain
24 chr1:95436400-95438200 Enhancers Fetal Muscle Leg muscle
25 chr1:95436600-95445200 Weak transcription Placenta Amnion Placenta Amnion
26 chr1:95436600-95451200 Weak transcription Small Intestine intestine
27 chr1:95436800-95448600 Weak transcription Brain Angular Gyrus brain
28 chr1:95437000-95437800 Enhancers Right Atrium heart
29 chr1:95437000-95440200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr1:95437000-95441200 Enhancers HSMMtube muscle
31 chr1:95437200-95437800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr1:95437200-95437800 Enhancers Ovary ovary
33 chr1:95437200-95437800 Flanking Active TSS NHEK skin
34 chr1:95437200-95438000 Enhancers Esophagus oesophagus
35 chr1:95437200-95438000 Enhancers Psoas Muscle Psoas
36 chr1:95437200-95438000 Enhancers HUVEC blood vessel
37 chr1:95437200-95439800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr1:95437400-95437800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr1:95437400-95438000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
40 chr1:95437400-95438000 Enhancers Spleen Spleen
41 chr1:95437400-95442000 Weak transcription Fetal Heart heart
42 chr1:95437600-95437800 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr1:95437600-95437800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
44 chr1:95437600-95437800 Enhancers Liver Liver
45 chr1:95437600-95437800 Enhancers Sigmoid Colon Sigmoid Colon
46 chr1:95437600-95438000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
47 chr1:95437600-95438000 Enhancers Fetal Muscle Trunk muscle
48 chr1:95437600-95438000 Enhancers Gastric stomach
49 chr1:95437600-95438000 Enhancers Right Ventricle heart
50 chr1:95437600-95438200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015