The 2.0 version of rSNPBase

Variant report

Variant rs7547662
Chromosome Location chr1:95457236-95457237
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95429000-95467600 Weak transcription Stomach Smooth Muscle stomach
2 chr1:95437800-95458400 Weak transcription Liver Liver
3 chr1:95446800-95457800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr1:95447000-95490800 Weak transcription Fetal Intestine Large intestine
5 chr1:95447600-95460400 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr1:95448200-95491000 Weak transcription Primary B cells from cord blood blood
7 chr1:95448800-95460000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr1:95449000-95458600 Weak transcription Right Ventricle heart
9 chr1:95449000-95460800 Weak transcription Fetal Kidney kidney
10 chr1:95450600-95460000 Weak transcription Fetal Lung lung
11 chr1:95452600-95467000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr1:95452800-95459200 Weak transcription Aorta Aorta
13 chr1:95452800-95460000 Weak transcription Primary T cells from cord blood blood
14 chr1:95452800-95468400 Weak transcription Fetal Intestine Small intestine
15 chr1:95453200-95463200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr1:95453600-95459200 Weak transcription Adipose Nuclei Adipose
17 chr1:95453600-95468400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr1:95453800-95459200 Weak transcription Spleen Spleen
19 chr1:95454000-95459200 Weak transcription Osteobl bone
20 chr1:95454000-95467600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr1:95454200-95459200 Weak transcription NH-A brain
22 chr1:95454200-95460200 Weak transcription Lung lung
23 chr1:95454400-95458400 Weak transcription HepG2 liver
24 chr1:95455200-95473600 Weak transcription Gastric stomach
25 chr1:95455400-95458400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr1:95455400-95459200 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr1:95455400-95459400 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr1:95455400-95467800 Weak transcription Brain Substantia Nigra brain
29 chr1:95455600-95458400 Weak transcription Right Atrium heart
30 chr1:95455600-95459200 Weak transcription Left Ventricle heart
31 chr1:95455600-95459200 Weak transcription Pancreas Pancrea
32 chr1:95455600-95461000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:95455600-95465000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr1:95455600-95467600 Weak transcription Brain Hippocampus Middle brain
35 chr1:95455800-95458000 Weak transcription Fetal Heart heart
36 chr1:95455800-95463400 Weak transcription HSMMtube muscle
37 chr1:95455800-95463600 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr1:95455800-95467800 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr1:95456000-95459800 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr1:95456000-95461400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr1:95456200-95457800 Weak transcription HUVEC blood vessel
42 chr1:95456200-95459200 Weak transcription Muscle Satellite Cultured Cells --
43 chr1:95456200-95461200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr1:95456200-95465000 Weak transcription Fetal Muscle Leg muscle
45 chr1:95457000-95468600 Weak transcription Pancreatic Islets Pancreatic Islet
46 chr1:95457200-95457600 Weak transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015