The 2.0 version of rSNPBase

Variant report

Variant rs6698046
Chromosome Location chr1:95449282-95449283
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95422000-95450800 Weak transcription Cortex derived primary cultured neurospheres brain
2 chr1:95429000-95467600 Weak transcription Stomach Smooth Muscle stomach
3 chr1:95436600-95451200 Weak transcription Small Intestine intestine
4 chr1:95437600-95455600 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr1:95437800-95455000 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr1:95437800-95458400 Weak transcription Liver Liver
7 chr1:95440200-95450600 Weak transcription Colon Smooth Muscle Colon
8 chr1:95445200-95450000 Enhancers Fetal Adrenal Gland Adrenal Gland
9 chr1:95445400-95449400 Enhancers HUVEC blood vessel
10 chr1:95446800-95455000 Weak transcription Left Ventricle heart
11 chr1:95446800-95457800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr1:95447000-95452200 Weak transcription Fetal Intestine Small intestine
13 chr1:95447000-95490800 Weak transcription Fetal Intestine Large intestine
14 chr1:95447600-95450800 Weak transcription Fetal Stomach stomach
15 chr1:95447600-95460400 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr1:95448000-95449400 Enhancers NHDF-Ad bronchial
17 chr1:95448000-95455000 Weak transcription Fetal Muscle Trunk muscle
18 chr1:95448200-95449400 Enhancers NHEK skin
19 chr1:95448200-95451200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr1:95448200-95491000 Weak transcription Primary B cells from cord blood blood
21 chr1:95448400-95452400 Enhancers HSMMtube muscle
22 chr1:95448600-95451200 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr1:95448800-95451200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr1:95448800-95452400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr1:95448800-95455000 Weak transcription Duodenum Mucosa Duodenum
26 chr1:95448800-95460000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr1:95449000-95449400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr1:95449000-95450400 Enhancers Muscle Satellite Cultured Cells --
29 chr1:95449000-95451800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr1:95449000-95453600 Weak transcription Psoas Muscle Psoas
31 chr1:95449000-95455000 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr1:95449000-95455000 Weak transcription Brain Hippocampus Middle brain
33 chr1:95449000-95455000 Weak transcription Stomach Mucosa stomach
34 chr1:95449000-95455400 Weak transcription Brain Angular Gyrus brain
35 chr1:95449000-95458600 Weak transcription Right Ventricle heart
36 chr1:95449000-95460800 Weak transcription Fetal Kidney kidney
37 chr1:95449200-95449400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr1:95449200-95449400 Enhancers Aorta Aorta
39 chr1:95449200-95449400 Enhancers Osteobl bone
40 chr1:95449200-95451000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr1:95449200-95451200 Weak transcription HepG2 liver
42 chr1:95449200-95451400 Weak transcription Brain Cingulate Gyrus brain
43 chr1:95449200-95452400 Weak transcription Primary T cells from cord blood blood
44 chr1:95449200-95452400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr1:95449200-95452400 Weak transcription HMEC breast
46 chr1:95449200-95452400 Weak transcription HSMM muscle
47 chr1:95449200-95452400 Weak transcription NH-A brain
48 chr1:95449200-95452400 Weak transcription NHLF lung
49 chr1:95449200-95452600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr1:95449200-95452600 Weak transcription Placenta Amnion Placenta Amnion

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Last update: Aug 31, 2015