Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1014585	0.91[AFR][1000 genomes];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10865307	0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1158041	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11682437	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11693731	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs13025286	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1861410	0.91[ASN][1000 genomes]
rs1922778	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1922779	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1922782	0.88[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs35881094	0.90[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs4541244	0.92[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs4672257	0.94[ASN][1000 genomes]
rs741310	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7572888	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7582485	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7582945	0.81[AFR][1000 genomes]
rs7586515	0.84[AFR][1000 genomes]
rs7591382	0.92[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs7591633	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7598875	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431180	chr2:58857542-59178687	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:58916800-58929200	Weak transcription	K562	blood

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