The 2.0 version of rSNPBase

Variant report

Variant rs12478664
Chromosome Location chr2:12149069-12149070
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:12145000-12149800 Enhancers Primary B cells from peripheral blood blood
2 chr2:12146400-12151000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr2:12146600-12153600 Weak transcription Primary monocytes fromperipheralblood blood
4 chr2:12146800-12150800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr2:12147400-12150000 Weak transcription Fetal Lung lung
6 chr2:12147400-12150800 Weak transcription Fetal Muscle Leg muscle
7 chr2:12147400-12154000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr2:12147600-12150800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr2:12147800-12153800 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr2:12148000-12149400 Weak transcription Liver Liver
11 chr2:12148000-12150200 Enhancers NHLF lung
12 chr2:12148200-12150400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr2:12148200-12152000 Enhancers HSMM muscle
14 chr2:12148600-12149200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
15 chr2:12148600-12149200 Enhancers HMEC breast
16 chr2:12148600-12149200 Enhancers NH-A brain
17 chr2:12148600-12149400 Enhancers Monocytes-CD14+_RO01746 blood
18 chr2:12148600-12150000 Enhancers NHDF-Ad bronchial
19 chr2:12148600-12150000 Enhancers Osteobl bone
20 chr2:12148600-12150400 Enhancers Primary hematopoietic stem cells blood
21 chr2:12148600-12150400 Enhancers Primary hematopoietic stem cells short term culture blood
22 chr2:12148600-12150800 Enhancers Muscle Satellite Cultured Cells --
23 chr2:12148800-12149200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr2:12148800-12149200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr2:12148800-12149200 Enhancers HUVEC blood vessel
26 chr2:12148800-12149600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
27 chr2:12148800-12149800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr2:12148800-12150000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr2:12148800-12150000 Enhancers K562 blood
30 chr2:12148800-12151200 Enhancers HSMMtube muscle
31 chr2:12148800-12151400 Flanking Active TSS GM12878-XiMat blood
32 chr2:12149000-12149200 Enhancers Primary B cells from cord blood blood
33 chr2:12149000-12149200 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
34 chr2:12149000-12150400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr2:12149000-12150800 Weak transcription NHEK skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015