The 2.0 version of rSNPBase

Variant report

Variant rs12464227
Chromosome Location chr2:12145411-12145412
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:28 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:12137200-12148800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr2:12139200-12146200 Weak transcription NHLF lung
3 chr2:12139600-12146200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr2:12141400-12147200 Weak transcription K562 blood
5 chr2:12142400-12145600 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr2:12144600-12145600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr2:12144600-12147200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr2:12144800-12147000 Enhancers Primary T cells from cord blood blood
9 chr2:12145000-12145600 Enhancers Dnd41 blood
10 chr2:12145000-12146200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
11 chr2:12145000-12146800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
12 chr2:12145000-12147200 Enhancers Primary T helper cells fromperipheralblood blood
13 chr2:12145000-12147200 Enhancers Primary T killer naive cells fromperipheralblood blood
14 chr2:12145000-12147400 Enhancers Primary hematopoietic stem cells short term culture blood
15 chr2:12145000-12147400 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
16 chr2:12145000-12147600 Enhancers Primary T killer memory cells from peripheral blood blood
17 chr2:12145000-12149800 Enhancers Primary B cells from peripheral blood blood
18 chr2:12145200-12146800 Enhancers Primary T cells fromperipheralblood blood
19 chr2:12145200-12147000 Enhancers Primary T helper naive cells fromperipheralblood blood
20 chr2:12145200-12147200 Enhancers Primary T helper cells PMA-I stimulated --
21 chr2:12145200-12147600 Enhancers HUVEC blood vessel
22 chr2:12145400-12146400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr2:12145400-12146400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
24 chr2:12145400-12146600 Flanking Active TSS GM12878-XiMat blood
25 chr2:12145400-12146800 Enhancers Primary B cells from cord blood blood
26 chr2:12145400-12146800 Enhancers Primary T helper 17 cells PMA-I stimulated --
27 chr2:12145400-12147000 Enhancers Primary T helper naive cells from peripheral blood blood
28 chr2:12145400-12147800 Enhancers Cortex derived primary cultured neurospheres brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015