The 2.0 version of rSNPBase

Variant report

Variant rs12478705
Chromosome Location chr2:12149235-12149236
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:12145000-12149800 Enhancers Primary B cells from peripheral blood blood
2 chr2:12146400-12151000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr2:12146600-12153600 Weak transcription Primary monocytes fromperipheralblood blood
4 chr2:12146800-12150800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr2:12147400-12150000 Weak transcription Fetal Lung lung
6 chr2:12147400-12150800 Weak transcription Fetal Muscle Leg muscle
7 chr2:12147400-12154000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr2:12147600-12150800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr2:12147800-12153800 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr2:12148000-12149400 Weak transcription Liver Liver
11 chr2:12148000-12150200 Enhancers NHLF lung
12 chr2:12148200-12150400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr2:12148200-12152000 Enhancers HSMM muscle
14 chr2:12148600-12149400 Enhancers Monocytes-CD14+_RO01746 blood
15 chr2:12148600-12150000 Enhancers NHDF-Ad bronchial
16 chr2:12148600-12150000 Enhancers Osteobl bone
17 chr2:12148600-12150400 Enhancers Primary hematopoietic stem cells blood
18 chr2:12148600-12150400 Enhancers Primary hematopoietic stem cells short term culture blood
19 chr2:12148600-12150800 Enhancers Muscle Satellite Cultured Cells --
20 chr2:12148800-12149600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
21 chr2:12148800-12149800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr2:12148800-12150000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr2:12148800-12150000 Enhancers K562 blood
24 chr2:12148800-12151200 Enhancers HSMMtube muscle
25 chr2:12148800-12151400 Flanking Active TSS GM12878-XiMat blood
26 chr2:12149000-12150400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr2:12149000-12150800 Weak transcription NHEK skin
28 chr2:12149200-12149800 Weak transcription NH-A brain
29 chr2:12149200-12150600 Weak transcription HMEC breast
30 chr2:12149200-12154000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015