The 2.0 version of rSNPBase

Variant report

Variant rs12478681
Chromosome Location chr2:153482128-153482129
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:153454800-153496600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr2:153457200-153505000 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr2:153463800-153502800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr2:153464000-153502800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr2:153467200-153504000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr2:153468000-153483200 Strong transcription Breast Myoepithelial Primary Cells Breast
7 chr2:153468600-153495800 Weak transcription Esophagus oesophagus
8 chr2:153468800-153492000 Weak transcription Liver Liver
9 chr2:153469000-153493800 Weak transcription Spleen Spleen
10 chr2:153469000-153496400 Weak transcription Colonic Mucosa Colon
11 chr2:153469000-153509800 Weak transcription Small Intestine intestine
12 chr2:153469200-153484400 Weak transcription Psoas Muscle Psoas
13 chr2:153469200-153495200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr2:153469600-153487200 Weak transcription Fetal Thymus thymus
15 chr2:153469600-153496800 Weak transcription HSMM muscle
16 chr2:153470400-153483600 Weak transcription Muscle Satellite Cultured Cells --
17 chr2:153470600-153483400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr2:153471000-153507000 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr2:153471400-153482800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr2:153471600-153482200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr2:153472000-153522000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr2:153473000-153500600 Weak transcription Placenta Amnion Placenta Amnion
23 chr2:153473800-153496400 Weak transcription Osteobl bone
24 chr2:153474400-153486200 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr2:153474400-153505000 Weak transcription ES-WA7 Cell Line embryonic stem cell
26 chr2:153474800-153484800 Weak transcription Ovary ovary
27 chr2:153475800-153493000 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr2:153476600-153492800 Weak transcription Gastric stomach
29 chr2:153477000-153484200 Weak transcription Hela-S3 cervix
30 chr2:153477200-153483200 Weak transcription Fetal Kidney kidney
31 chr2:153477200-153484800 Weak transcription Stomach Smooth Muscle stomach
32 chr2:153477600-153489800 Weak transcription Rectal Smooth Muscle rectum
33 chr2:153477800-153483000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr2:153477800-153483200 Weak transcription NHDF-Ad bronchial
35 chr2:153477800-153486200 Weak transcription Rectal Mucosa Donor 31 rectum
36 chr2:153477800-153488000 Weak transcription Duodenum Mucosa Duodenum
37 chr2:153477800-153488200 Weak transcription Pancreas Pancrea
38 chr2:153477800-153488400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr2:153477800-153488400 Weak transcription Colon Smooth Muscle Colon
40 chr2:153477800-153493800 Weak transcription HSMMtube muscle
41 chr2:153477800-153496000 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr2:153477800-153496600 Weak transcription Aorta Aorta
43 chr2:153478000-153484600 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr2:153478000-153484600 Weak transcription HUVEC blood vessel
45 chr2:153478200-153484600 Weak transcription H9 Cell Line embryonic stem cell
46 chr2:153478200-153487000 Weak transcription Brain Germinal Matrix brain
47 chr2:153478600-153483400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr2:153478600-153488600 Weak transcription Right Ventricle heart
49 chr2:153478800-153484400 Weak transcription Lung lung
50 chr2:153478800-153484600 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015