The 2.0 version of rSNPBase

Variant report

Variant rs36122595
Chromosome Location chr2:153545280-153545281
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:153506200-153546800 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr2:153508000-153550800 Strong transcription Primary monocytes fromperipheralblood blood
3 chr2:153509200-153551200 Strong transcription HUES48 Cell Line embryonic stem cell
4 chr2:153518400-153551000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr2:153518800-153558000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr2:153523000-153557800 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr2:153523400-153571800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr2:153525000-153557800 Weak transcription Lung lung
9 chr2:153525000-153571800 Weak transcription Small Intestine intestine
10 chr2:153532400-153550800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr2:153533200-153549000 Weak transcription Fetal Muscle Trunk muscle
12 chr2:153533200-153551000 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr2:153533200-153551600 Weak transcription Colon Smooth Muscle Colon
14 chr2:153533200-153558000 Weak transcription Colonic Mucosa Colon
15 chr2:153533400-153546800 Weak transcription Fetal Intestine Small intestine
16 chr2:153533400-153549600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr2:153533400-153557800 Weak transcription Fetal Stomach stomach
18 chr2:153533400-153558600 Weak transcription Aorta Aorta
19 chr2:153533400-153571600 Weak transcription Brain Inferior Temporal Lobe brain
20 chr2:153533800-153550200 Weak transcription Rectal Smooth Muscle rectum
21 chr2:153533800-153558000 Weak transcription Stomach Smooth Muscle stomach
22 chr2:153533800-153572600 Weak transcription Fetal Brain Male brain
23 chr2:153534000-153546800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr2:153536000-153546000 Weak transcription ES-WA7 Cell Line embryonic stem cell
25 chr2:153536000-153546000 Weak transcription Fetal Intestine Large intestine
26 chr2:153536000-153572600 Weak transcription Placenta Amnion Placenta Amnion
27 chr2:153536200-153550200 Weak transcription NHLF lung
28 chr2:153537200-153549000 Weak transcription Fetal Muscle Leg muscle
29 chr2:153537200-153557200 Weak transcription Thymus Thymus
30 chr2:153537400-153550600 Weak transcription Brain Hippocampus Middle brain
31 chr2:153537400-153565400 Weak transcription H9 Cell Line embryonic stem cell
32 chr2:153537600-153548600 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr2:153537600-153550600 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr2:153537600-153557400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr2:153537600-153558400 Weak transcription Fetal Brain Female brain
36 chr2:153537600-153571800 Weak transcription Brain Cingulate Gyrus brain
37 chr2:153537800-153548400 Weak transcription Adipose Nuclei Adipose
38 chr2:153537800-153548800 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr2:153537800-153548800 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr2:153537800-153548800 Weak transcription Fetal Lung lung
41 chr2:153537800-153549000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr2:153537800-153549600 Weak transcription Hela-S3 cervix
43 chr2:153537800-153550600 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr2:153537800-153550800 Weak transcription Brain Substantia Nigra brain
45 chr2:153537800-153557800 Weak transcription Brain Germinal Matrix brain
46 chr2:153538000-153548400 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr2:153538000-153548600 Weak transcription Primary neutrophils fromperipheralblood blood
48 chr2:153538000-153550600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr2:153538000-153550600 Weak transcription HSMMtube muscle
50 chr2:153538200-153547000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015