The 2.0 version of rSNPBase

Variant report

Variant rs66849546
Chromosome Location chr2:153507651-153507652
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:153469000-153509800 Weak transcription Small Intestine intestine
2 chr2:153472000-153522000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr2:153492000-153508200 Weak transcription Primary B cells from cord blood blood
4 chr2:153492400-153513400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr2:153495400-153517400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr2:153497000-153531800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr2:153497200-153514000 Weak transcription Colonic Mucosa Colon
8 chr2:153497200-153521200 Weak transcription Esophagus oesophagus
9 chr2:153497400-153516200 Weak transcription Spleen Spleen
10 chr2:153498400-153512200 Weak transcription Thymus Thymus
11 chr2:153500000-153512200 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr2:153500400-153517200 Weak transcription Hela-S3 cervix
13 chr2:153500800-153509800 Weak transcription Primary neutrophils fromperipheralblood blood
14 chr2:153501200-153508400 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr2:153501400-153531800 Weak transcription Aorta Aorta
16 chr2:153502200-153508400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr2:153503000-153510600 Weak transcription Fetal Muscle Trunk muscle
18 chr2:153503200-153508400 Weak transcription Primary T helper naive cells fromperipheralblood blood
19 chr2:153503200-153512200 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr2:153503400-153509800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr2:153503400-153512800 Weak transcription Fetal Stomach stomach
22 chr2:153503600-153512400 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr2:153503800-153514600 Weak transcription Placenta Amnion Placenta Amnion
24 chr2:153504400-153508200 Weak transcription HSMM muscle
25 chr2:153504400-153508600 Weak transcription Fetal Lung lung
26 chr2:153504400-153538200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr2:153504600-153508600 Weak transcription Stomach Smooth Muscle stomach
28 chr2:153504600-153508600 Weak transcription K562 blood
29 chr2:153504600-153512200 Weak transcription Fetal Muscle Leg muscle
30 chr2:153504600-153512800 Weak transcription Lung lung
31 chr2:153504600-153513600 Weak transcription Fetal Kidney kidney
32 chr2:153504600-153514800 Weak transcription Fetal Heart heart
33 chr2:153504600-153516000 Weak transcription Fetal Intestine Small intestine
34 chr2:153504800-153508400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr2:153504800-153508800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr2:153504800-153512200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr2:153505000-153508000 Weak transcription NH-A brain
38 chr2:153505000-153508800 Weak transcription Osteobl bone
39 chr2:153505000-153509200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
40 chr2:153505000-153509200 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr2:153505000-153510000 Weak transcription Muscle Satellite Cultured Cells --
42 chr2:153505000-153510600 Weak transcription H1 Cell Line embryonic stem cell
43 chr2:153505000-153511000 Weak transcription Fetal Brain Female brain
44 chr2:153505000-153512200 Weak transcription Psoas Muscle Psoas
45 chr2:153505000-153512200 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr2:153505000-153512400 Weak transcription Colon Smooth Muscle Colon
47 chr2:153505000-153512600 Weak transcription Fetal Brain Male brain
48 chr2:153505000-153513200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr2:153505000-153513200 Weak transcription Pancreas Pancrea
50 chr2:153505000-153513400 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015