The 2.0 version of rSNPBase

Variant report

Variant rs12495713
Chromosome Location chr3:113486538-113486539
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:113466800-113489000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr3:113467200-113504000 Weak transcription Fetal Stomach stomach
3 chr3:113467200-113514800 Weak transcription Rectal Smooth Muscle rectum
4 chr3:113467200-113528600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr3:113467600-113488400 Weak transcription NH-A brain
6 chr3:113468000-113487800 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr3:113468000-113488200 Weak transcription A549 lung
8 chr3:113468000-113488600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr3:113468000-113495200 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr3:113468000-113499800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr3:113468000-113502800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr3:113468200-113488400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr3:113468600-113488400 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr3:113469000-113519400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr3:113469600-113502400 Weak transcription Hela-S3 cervix
16 chr3:113469800-113499800 Weak transcription Fetal Intestine Small intestine
17 chr3:113472600-113505800 Weak transcription Right Ventricle heart
18 chr3:113472800-113504400 Weak transcription Lung lung
19 chr3:113473400-113498800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr3:113473600-113502400 Weak transcription Brain Hippocampus Middle brain
21 chr3:113473800-113492200 Weak transcription Colon Smooth Muscle Colon
22 chr3:113474200-113501600 Weak transcription HUVEC blood vessel
23 chr3:113476600-113488400 Weak transcription HSMM muscle
24 chr3:113477400-113492000 Weak transcription Dnd41 blood
25 chr3:113477600-113490800 Weak transcription Fetal Intestine Large intestine
26 chr3:113477600-113492200 Weak transcription Primary T cells from cord blood blood
27 chr3:113477800-113487800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr3:113477800-113488000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr3:113477800-113488200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr3:113477800-113488400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr3:113477800-113501800 Weak transcription Primary hematopoietic stem cells blood
32 chr3:113477800-113505000 Weak transcription Brain Substantia Nigra brain
33 chr3:113477800-113513200 Weak transcription Fetal Brain Male brain
34 chr3:113478000-113488200 Weak transcription Liver Liver
35 chr3:113478000-113488200 Weak transcription HSMMtube muscle
36 chr3:113478000-113488200 Weak transcription NHDF-Ad bronchial
37 chr3:113478000-113488400 Weak transcription NHEK skin
38 chr3:113478000-113492400 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr3:113478000-113499400 Weak transcription Primary B cells from cord blood blood
40 chr3:113478000-113501800 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr3:113478000-113502600 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr3:113478200-113492000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr3:113478200-113502400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr3:113478800-113490800 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr3:113479200-113502000 Weak transcription GM12878-XiMat blood
46 chr3:113480000-113492600 Weak transcription Primary T helper cells fromperipheralblood blood
47 chr3:113480800-113516600 Weak transcription H9 Cell Line embryonic stem cell
48 chr3:113482800-113488400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr3:113482800-113506000 Weak transcription Thymus Thymus
50 chr3:113483400-113490800 Weak transcription Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015