The 2.0 version of rSNPBase

Variant report

Variant rs12491540
Chromosome Location chr3:113383221-113383222
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:113368000-113383400 Weak transcription Colonic Mucosa Colon
2 chr3:113371800-113386800 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr3:113373200-113383800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
4 chr3:113373200-113386800 Weak transcription HUVEC blood vessel
5 chr3:113373400-113384600 Strong transcription Monocytes-CD14+_RO01746 blood
6 chr3:113373600-113384600 Strong transcription Primary T cells from cord blood blood
7 chr3:113373800-113384000 Strong transcription Primary T cells fromperipheralblood blood
8 chr3:113373800-113384600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr3:113373800-113386200 Strong transcription Breast Myoepithelial Primary Cells Breast
10 chr3:113374000-113386800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr3:113374200-113384200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr3:113374400-113384200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr3:113375800-113384600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
14 chr3:113375800-113384800 Strong transcription Adipose Nuclei Adipose
15 chr3:113376200-113386400 Strong transcription Primary monocytes fromperipheralblood blood
16 chr3:113376400-113384200 Strong transcription Primary neutrophils fromperipheralblood blood
17 chr3:113376600-113404800 Weak transcription Hela-S3 cervix
18 chr3:113376800-113384200 Strong transcription Primary T helper cells fromperipheralblood blood
19 chr3:113376800-113384800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr3:113377000-113386800 Weak transcription NHDF-Ad bronchial
21 chr3:113377200-113384400 Strong transcription Primary T helper cells PMA-I stimulated --
22 chr3:113377200-113384800 Strong transcription Primary T helper naive cells fromperipheralblood blood
23 chr3:113377600-113384400 Strong transcription Primary T regulatory cells fromperipheralblood blood
24 chr3:113379000-113384800 Strong transcription Fetal Thymus thymus
25 chr3:113379000-113403400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
26 chr3:113379600-113386600 Weak transcription NHLF lung
27 chr3:113379600-113391200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr3:113379600-113391400 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr3:113379600-113394200 Weak transcription NHEK skin
30 chr3:113379600-113404800 Weak transcription Right Ventricle heart
31 chr3:113379800-113386800 Weak transcription iPS-18 Cell Line embryonic stem cell
32 chr3:113379800-113386800 Weak transcription Psoas Muscle Psoas
33 chr3:113379800-113387000 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr3:113379800-113394200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr3:113380000-113383400 Weak transcription Brain Germinal Matrix brain
36 chr3:113380000-113383600 Weak transcription Gastric stomach
37 chr3:113380000-113383800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr3:113380000-113383800 Weak transcription Ovary ovary
39 chr3:113380000-113384000 Weak transcription Fetal Stomach stomach
40 chr3:113380000-113386200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
41 chr3:113380000-113386800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr3:113380000-113386800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr3:113380000-113386800 Weak transcription Osteobl bone
44 chr3:113380000-113387000 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr3:113380000-113391800 Weak transcription Brain Hippocampus Middle brain
46 chr3:113380000-113392600 Weak transcription Placenta Placenta
47 chr3:113380000-113393000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr3:113380000-113395000 Weak transcription Brain Anterior Caudate brain
49 chr3:113380000-113395000 Weak transcription Brain Inferior Temporal Lobe brain
50 chr3:113380000-113395200 Weak transcription Lung lung

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Last update: Aug 31, 2015