The 2.0 version of rSNPBase

Variant report

Variant rs16861331
Chromosome Location chr3:113499823-113499824
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:113467200-113504000 Weak transcription Fetal Stomach stomach
2 chr3:113467200-113514800 Weak transcription Rectal Smooth Muscle rectum
3 chr3:113467200-113528600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr3:113468000-113502800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr3:113469000-113519400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr3:113469600-113502400 Weak transcription Hela-S3 cervix
7 chr3:113472600-113505800 Weak transcription Right Ventricle heart
8 chr3:113472800-113504400 Weak transcription Lung lung
9 chr3:113473600-113502400 Weak transcription Brain Hippocampus Middle brain
10 chr3:113474200-113501600 Weak transcription HUVEC blood vessel
11 chr3:113477800-113501800 Weak transcription Primary hematopoietic stem cells blood
12 chr3:113477800-113505000 Weak transcription Brain Substantia Nigra brain
13 chr3:113477800-113513200 Weak transcription Fetal Brain Male brain
14 chr3:113478000-113501800 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr3:113478000-113502600 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr3:113478200-113502400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr3:113479200-113502000 Weak transcription GM12878-XiMat blood
18 chr3:113480800-113516600 Weak transcription H9 Cell Line embryonic stem cell
19 chr3:113482800-113506000 Weak transcription Thymus Thymus
20 chr3:113483400-113505600 Weak transcription Fetal Muscle Trunk muscle
21 chr3:113486800-113502000 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr3:113487200-113513200 Weak transcription K562 blood
23 chr3:113487800-113512400 Weak transcription Stomach Smooth Muscle stomach
24 chr3:113487800-113527800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr3:113488000-113513400 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr3:113488200-113505000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr3:113488200-113508400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr3:113488800-113501200 Weak transcription HSMMtube muscle
29 chr3:113488800-113501600 Weak transcription Muscle Satellite Cultured Cells --
30 chr3:113488800-113502400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr3:113488800-113504600 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr3:113488800-113506200 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr3:113491000-113505600 Weak transcription Brain Angular Gyrus brain
34 chr3:113491000-113513400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr3:113491200-113501600 Weak transcription NHLF lung
36 chr3:113491200-113505000 Weak transcription Brain Inferior Temporal Lobe brain
37 chr3:113491200-113505000 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr3:113491200-113513400 Weak transcription HepG2 liver
39 chr3:113491200-113524600 Weak transcription Psoas Muscle Psoas
40 chr3:113491200-113532600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr3:113492800-113502200 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr3:113492800-113505000 Weak transcription Primary T helper cells PMA-I stimulated --
43 chr3:113492800-113505800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr3:113493000-113501600 Weak transcription Osteobl bone
45 chr3:113493200-113501600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr3:113493200-113501800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr3:113493200-113501800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr3:113493200-113502400 Weak transcription Primary T cells from cord blood blood
49 chr3:113493200-113502600 Weak transcription Dnd41 blood
50 chr3:113493200-113505000 Weak transcription Fetal Thymus thymus

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Last update: Aug 31, 2015