The 2.0 version of rSNPBase

Variant report

Variant rs12495298
Chromosome Location chr3:113380232-113380233
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:113368000-113383400 Weak transcription Colonic Mucosa Colon
2 chr3:113371600-113382400 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr3:113371800-113386800 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr3:113373200-113383800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
5 chr3:113373200-113386800 Weak transcription HUVEC blood vessel
6 chr3:113373400-113384600 Strong transcription Monocytes-CD14+_RO01746 blood
7 chr3:113373600-113381800 Weak transcription Small Intestine intestine
8 chr3:113373600-113382600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr3:113373600-113384600 Strong transcription Primary T cells from cord blood blood
10 chr3:113373800-113384000 Strong transcription Primary T cells fromperipheralblood blood
11 chr3:113373800-113384600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr3:113373800-113386200 Strong transcription Breast Myoepithelial Primary Cells Breast
13 chr3:113374000-113381600 Weak transcription Stomach Mucosa stomach
14 chr3:113374000-113386800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr3:113374200-113384200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr3:113374400-113384200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr3:113374600-113382000 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr3:113375200-113382600 Strong transcription Fetal Adrenal Gland Adrenal Gland
19 chr3:113375400-113381800 Strong transcription Duodenum Mucosa Duodenum
20 chr3:113375600-113383200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr3:113375800-113380600 Strong transcription Fetal Intestine Small intestine
22 chr3:113375800-113381400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr3:113375800-113381800 Strong transcription Sigmoid Colon Sigmoid Colon
24 chr3:113375800-113384600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
25 chr3:113375800-113384800 Strong transcription Adipose Nuclei Adipose
26 chr3:113376000-113383000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr3:113376200-113380800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr3:113376200-113381800 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr3:113376200-113381800 Strong transcription Rectal Mucosa Donor 31 rectum
30 chr3:113376200-113382200 Strong transcription Primary hematopoietic stem cells blood
31 chr3:113376200-113386400 Strong transcription Primary monocytes fromperipheralblood blood
32 chr3:113376400-113380600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr3:113376400-113384200 Strong transcription Primary neutrophils fromperipheralblood blood
34 chr3:113376600-113382000 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr3:113376600-113404800 Weak transcription Hela-S3 cervix
36 chr3:113376800-113384200 Strong transcription Primary T helper cells fromperipheralblood blood
37 chr3:113376800-113384800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr3:113377000-113386800 Weak transcription NHDF-Ad bronchial
39 chr3:113377200-113384400 Strong transcription Primary T helper cells PMA-I stimulated --
40 chr3:113377200-113384800 Strong transcription Primary T helper naive cells fromperipheralblood blood
41 chr3:113377600-113382400 Strong transcription Esophagus oesophagus
42 chr3:113377600-113384400 Strong transcription Primary T regulatory cells fromperipheralblood blood
43 chr3:113378000-113380400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr3:113378000-113382000 Strong transcription Primary T killer naive cells fromperipheralblood blood
45 chr3:113378200-113380600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr3:113378200-113381200 Weak transcription Right Atrium heart
47 chr3:113378600-113381000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr3:113378600-113382400 Strong transcription Thymus Thymus
49 chr3:113378800-113381600 Strong transcription Rectal Mucosa Donor 29 rectum
50 chr3:113378800-113382400 Genic enhancers Primary B cells from peripheral blood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015