The 2.0 version of rSNPBase

Variant report

Variant rs12500244
Chromosome Location chr4:48706542-48706543
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:48621200-48729400 Weak transcription Thymus Thymus
2 chr4:48686800-48708800 Weak transcription Primary hematopoietic stem cells short term culture blood
3 chr4:48687000-48708400 Weak transcription Primary hematopoietic stem cells blood
4 chr4:48687200-48708400 Weak transcription Primary B cells from cord blood blood
5 chr4:48691600-48710400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr4:48695400-48711200 Weak transcription Rectal Smooth Muscle rectum
7 chr4:48696600-48710600 Weak transcription Lung lung
8 chr4:48697200-48708600 Weak transcription Left Ventricle heart
9 chr4:48700200-48730800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr4:48700400-48713200 Weak transcription Placenta Placenta
11 chr4:48700400-48718800 Weak transcription Fetal Muscle Leg muscle
12 chr4:48700600-48708000 Weak transcription Fetal Thymus thymus
13 chr4:48700600-48708400 Weak transcription Primary B cells from peripheral blood blood
14 chr4:48700600-48719600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr4:48700800-48708000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr4:48700800-48708800 Weak transcription Ovary ovary
17 chr4:48700800-48712200 Weak transcription Brain Germinal Matrix brain
18 chr4:48700800-48715600 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr4:48701000-48708600 Weak transcription Primary monocytes fromperipheralblood blood
20 chr4:48701000-48710400 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr4:48701000-48710600 Weak transcription Adipose Nuclei Adipose
22 chr4:48701000-48711200 Weak transcription Primary neutrophils fromperipheralblood blood
23 chr4:48701000-48712000 Weak transcription Right Ventricle heart
24 chr4:48701000-48712200 Weak transcription Fetal Heart heart
25 chr4:48701000-48713000 Weak transcription Fetal Brain Male brain
26 chr4:48701000-48715200 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr4:48701000-48729600 Weak transcription Aorta Aorta
28 chr4:48701200-48708800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr4:48701200-48710600 Weak transcription Monocytes-CD14+_RO01746 blood
30 chr4:48701400-48713600 Weak transcription Fetal Brain Female brain
31 chr4:48701800-48710800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr4:48701800-48715400 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr4:48701800-48715800 Weak transcription Fetal Kidney kidney
34 chr4:48701800-48724600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr4:48702000-48707600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr4:48702000-48710400 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr4:48702200-48716200 Weak transcription Skeletal Muscle Female skeletal muscle
38 chr4:48702400-48708200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr4:48702400-48708200 Weak transcription Fetal Lung lung
40 chr4:48702400-48708600 Weak transcription Pancreatic Islets Pancreatic Islet
41 chr4:48702400-48708800 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr4:48702400-48710600 Weak transcription Liver Liver
43 chr4:48702400-48711200 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr4:48702600-48708400 Weak transcription Primary T cells from cord blood blood
45 chr4:48702600-48708400 Weak transcription Primary T helper cells fromperipheralblood blood
46 chr4:48702600-48710400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr4:48702600-48710600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr4:48702600-48710800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr4:48702600-48711200 Weak transcription Primary T killer memory cells from peripheral blood blood
50 chr4:48702600-48717400 Weak transcription Colon Smooth Muscle Colon

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Last update: Aug 31, 2015