The 2.0 version of rSNPBase

Variant report

Variant rs6821456
Chromosome Location chr4:48505646-48505647
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:48487200-48505800 Weak transcription A549 lung
2 chr4:48492600-48510600 Weak transcription HepG2 liver
3 chr4:48493600-48509200 Weak transcription Pancreas Pancrea
4 chr4:48493600-48510600 Weak transcription Gastric stomach
5 chr4:48493600-48523000 Weak transcription Right Ventricle heart
6 chr4:48493800-48509600 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr4:48493800-48510600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr4:48494000-48511600 Weak transcription Placenta Amnion Placenta Amnion
9 chr4:48494000-48511800 Weak transcription Colon Smooth Muscle Colon
10 chr4:48494200-48509800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr4:48494200-48510600 Weak transcription HSMMtube muscle
12 chr4:48494800-48509400 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr4:48494800-48510600 Weak transcription Esophagus oesophagus
14 chr4:48495000-48510000 Weak transcription Brain Germinal Matrix brain
15 chr4:48495200-48513600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr4:48495400-48523000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr4:48495600-48509600 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr4:48495600-48509800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr4:48495800-48511600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr4:48496000-48506200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr4:48496200-48540600 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr4:48496400-48510600 Weak transcription Small Intestine intestine
23 chr4:48496800-48511400 Weak transcription Fetal Heart heart
24 chr4:48497000-48507600 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr4:48497000-48521600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr4:48497200-48507800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr4:48497600-48509200 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr4:48497800-48509200 Weak transcription Psoas Muscle Psoas
29 chr4:48498000-48507800 Weak transcription Lung lung
30 chr4:48498200-48539600 Strong transcription Rectal Mucosa Donor 29 rectum
31 chr4:48498200-48540000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr4:48498400-48509800 Weak transcription Aorta Aorta
33 chr4:48498400-48511600 Weak transcription Stomach Mucosa stomach
34 chr4:48498400-48511800 Weak transcription Fetal Brain Male brain
35 chr4:48498600-48593000 Strong transcription Rectal Mucosa Donor 31 rectum
36 chr4:48499000-48510600 Weak transcription H9 Cell Line embryonic stem cell
37 chr4:48499000-48578800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
38 chr4:48499000-48589400 Strong transcription Primary monocytes fromperipheralblood blood
39 chr4:48499200-48540000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr4:48499400-48527400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr4:48499600-48581400 Strong transcription Dnd41 blood
42 chr4:48499800-48506200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr4:48499800-48506600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr4:48499800-48511600 Strong transcription Cortex derived primary cultured neurospheres brain
45 chr4:48499800-48540000 Strong transcription Primary T cells fromperipheralblood blood
46 chr4:48500200-48517400 Strong transcription Primary B cells from peripheral blood blood
47 chr4:48500200-48588800 Strong transcription Monocytes-CD14+_RO01746 blood
48 chr4:48500400-48540000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr4:48501000-48538800 Strong transcription Primary neutrophils fromperipheralblood blood
50 chr4:48501200-48506000 Weak transcription iPS-15b Cell Line embryonic stem cell

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Last update: Aug 31, 2015