Variant report
| Variant | rs1712771 |
|---|---|
| Chromosome Location | chr4:48620795-48620796 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:48515800-48625000 | Weak transcription | Hela-S3 | cervix |
| 2 | chr4:48557800-48622400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 3 | chr4:48562800-48623200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 4 | chr4:48563000-48637400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 5 | chr4:48575200-48643000 | Weak transcription | HSMMtube | muscle |
| 6 | chr4:48578600-48637000 | Weak transcription | Esophagus | oesophagus |
| 7 | chr4:48588400-48644600 | Weak transcription | Colon Smooth Muscle | Colon |
| 8 | chr4:48590600-48627600 | Weak transcription | Fetal Brain Female | brain |
| 9 | chr4:48591200-48626600 | Weak transcription | Ovary | ovary |
| 10 | chr4:48592200-48623200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 11 | chr4:48592400-48620800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 12 | chr4:48594000-48622600 | Weak transcription | Psoas Muscle | Psoas |
| 13 | chr4:48594000-48637400 | Weak transcription | Spleen | Spleen |
| 14 | chr4:48597000-48620800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 15 | chr4:48597800-48644600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 16 | chr4:48598000-48623000 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 17 | chr4:48598200-48634800 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 18 | chr4:48601000-48620800 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 19 | chr4:48605200-48621400 | Weak transcription | HMEC | breast |
| 20 | chr4:48605400-48622000 | Weak transcription | Osteobl | bone |
| 21 | chr4:48605600-48620800 | Weak transcription | NHDF-Ad | bronchial |
| 22 | chr4:48605600-48621000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 23 | chr4:48606000-48626800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 24 | chr4:48606200-48620800 | Weak transcription | Fetal Heart | heart |
| 25 | chr4:48606800-48622400 | Weak transcription | Brain Angular Gyrus | brain |
| 26 | chr4:48606800-48624800 | Weak transcription | Right Ventricle | heart |
| 27 | chr4:48606800-48637800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 28 | chr4:48606800-48645000 | Weak transcription | Gastric | stomach |
| 29 | chr4:48607000-48625400 | Weak transcription | Stomach Mucosa | stomach |
| 30 | chr4:48607400-48622400 | Weak transcription | HepG2 | liver |
| 31 | chr4:48608000-48625400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 32 | chr4:48609600-48622000 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 33 | chr4:48609800-48637000 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 34 | chr4:48611400-48623800 | Weak transcription | Fetal Brain Male | brain |
| 35 | chr4:48611800-48621200 | Weak transcription | NHEK | skin |
| 36 | chr4:48613000-48624800 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 37 | chr4:48613400-48623000 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 38 | chr4:48614200-48622000 | Weak transcription | Brain Anterior Caudate | brain |
| 39 | chr4:48614200-48622200 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 40 | chr4:48614400-48621800 | Weak transcription | Brain Hippocampus Middle | brain |
| 41 | chr4:48614400-48628800 | Weak transcription | Fetal Kidney | kidney |
| 42 | chr4:48614600-48637000 | Weak transcription | Small Intestine | intestine |
| 43 | chr4:48615600-48623400 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 44 | chr4:48616200-48625400 | Strong transcription | Primary B cells from cord blood | blood |
| 45 | chr4:48616400-48625600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 46 | chr4:48616600-48624200 | Weak transcription | Brain Germinal Matrix | brain |
| 47 | chr4:48617200-48621800 | Strong transcription | Fetal Intestine Large | intestine |
| 48 | chr4:48617200-48623200 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 49 | chr4:48617200-48623400 | Strong transcription | Primary T cells from cord blood | blood |
| 50 | chr4:48617600-48623200 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
