The 2.0 version of rSNPBase

Variant report

Variant rs707720
Chromosome Location chr4:48670965-48670966
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:48621200-48729400 Weak transcription Thymus Thymus
2 chr4:48638400-48686200 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr4:48645200-48679400 Weak transcription Rectal Smooth Muscle rectum
4 chr4:48655800-48685600 Weak transcription Monocytes-CD14+_RO01746 blood
5 chr4:48656600-48674200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr4:48656600-48680200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr4:48657400-48686000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr4:48657400-48688600 Weak transcription Brain Angular Gyrus brain
9 chr4:48657600-48688600 Weak transcription Brain Cingulate Gyrus brain
10 chr4:48663600-48700200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr4:48664400-48683200 Weak transcription Ovary ovary
12 chr4:48665000-48677600 Weak transcription Fetal Stomach stomach
13 chr4:48665800-48671400 Enhancers Fetal Intestine Small intestine
14 chr4:48665800-48671600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr4:48666000-48671200 Enhancers Fetal Intestine Large intestine
16 chr4:48666000-48671400 Enhancers Primary T helper 17 cells PMA-I stimulated --
17 chr4:48666200-48672600 Weak transcription Primary B cells from cord blood blood
18 chr4:48666400-48683200 Weak transcription Pancreas Pancrea
19 chr4:48666600-48685600 Weak transcription Dnd41 blood
20 chr4:48666600-48686800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr4:48667000-48671400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
22 chr4:48667200-48671400 Enhancers Primary T helper cells PMA-I stimulated --
23 chr4:48667600-48671400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr4:48667600-48671400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr4:48667600-48671400 Enhancers HUVEC blood vessel
26 chr4:48668000-48672600 Weak transcription Fetal Lung lung
27 chr4:48668200-48671000 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr4:48668200-48671600 Enhancers Rectal Mucosa Donor 31 rectum
29 chr4:48668200-48676000 Weak transcription Muscle Satellite Cultured Cells --
30 chr4:48668200-48676800 Weak transcription Primary T regulatory cells fromperipheralblood blood
31 chr4:48668200-48683000 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr4:48668200-48686200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr4:48668200-48688000 Weak transcription Brain Hippocampus Middle brain
34 chr4:48668200-48689400 Weak transcription HSMM muscle
35 chr4:48669000-48671000 Enhancers Small Intestine intestine
36 chr4:48669200-48671400 Enhancers Primary T helper naive cells from peripheral blood blood
37 chr4:48669400-48671400 Enhancers Stomach Mucosa stomach
38 chr4:48669400-48672600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr4:48669400-48683000 Weak transcription Primary T cells from cord blood blood
40 chr4:48669600-48671000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
41 chr4:48669800-48671400 Enhancers Right Atrium heart
42 chr4:48669800-48671600 Enhancers HMEC breast
43 chr4:48669800-48672400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr4:48669800-48674200 Weak transcription Gastric stomach
45 chr4:48670000-48671000 Enhancers Fetal Heart heart
46 chr4:48670000-48671400 Enhancers Skeletal Muscle Male skeletal muscle
47 chr4:48670000-48671400 Enhancers GM12878-XiMat blood
48 chr4:48670000-48671600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr4:48670000-48691000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr4:48670200-48671400 Weak transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015