Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:110922594..110925099-chr4:111433371..111435082,2	MCF-7	breast:
2	chr4:110920202..110921754-chr4:110921805..110924269,2	K562	blood:

Variant related genes	Relation type
ENSG00000138792	Chromatin interaction

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1024599	0.94[MEX][hapmap]
rs10488883	0.82[ASN][1000 genomes]
rs11098059	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11098062	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11568942	0.89[MEX][hapmap]
rs11569093	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11569149	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12500716	0.83[MEX][hapmap]
rs12506362	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12511518	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2074391	1.00[MEX][hapmap];0.84[AMR][1000 genomes]
rs2237044	0.94[MEX][hapmap]
rs3733627	1.00[ASW][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs3756266	0.94[MEX][hapmap]
rs3756267	0.94[MEX][hapmap]
rs3796940	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs3796941	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs3822286	1.00[ASW][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];0.83[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4698757	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4698804	0.80[AMR][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:110895000-110928600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr4:110901000-110929600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr4:110907000-110932400	Weak transcription	Psoas Muscle	Psoas
4	chr4:110907800-110927400	Weak transcription	Skeletal Muscle Male	skeletal muscle
5	chr4:110910400-110935200	Weak transcription	Pancreas	Pancrea
6	chr4:110910600-110929800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr4:110910800-110926800	Weak transcription	Fetal Heart	heart
8	chr4:110919000-110935200	Weak transcription	Left Ventricle	heart
9	chr4:110920800-110935800	Strong transcription	Skeletal Muscle Female	skeletal muscle
10	chr4:110921000-110923400	Weak transcription	Rectal Mucosa Donor 31	rectum
11	chr4:110921000-110924800	Weak transcription	Fetal Intestine Large	intestine
12	chr4:110921000-110926800	Weak transcription	Duodenum Mucosa	Duodenum
13	chr4:110921000-110926800	Weak transcription	HepG2	liver
14	chr4:110921000-110927600	Weak transcription	Fetal Intestine Small	intestine
15	chr4:110923000-110923800	Bivalent Enhancer	Monocytes-CD14+_RO01746	blood

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