Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10008969	1.00[CEU][hapmap]
rs10011256	1.00[CEU][hapmap]
rs10021246	1.00[CEU][hapmap]
rs10021699	1.00[CEU][hapmap]
rs10024160	1.00[CEU][hapmap]
rs10025706	1.00[CEU][hapmap]
rs10029765	1.00[CEU][hapmap]
rs11098059	0.82[CHB][hapmap];0.86[JPT][hapmap];0.82[ASN][1000 genomes]
rs12506362	0.82[CHB][hapmap];0.86[JPT][hapmap];0.82[ASN][1000 genomes]
rs12507356	0.81[CHB][hapmap];0.85[JPT][hapmap];0.82[ASN][1000 genomes]
rs12648439	0.84[AMR][1000 genomes]
rs17040963	1.00[CEU][hapmap]
rs17041311	1.00[CEU][hapmap]
rs17041322	1.00[CEU][hapmap]
rs1860131	1.00[CEU][hapmap]
rs2074391	0.81[AMR][1000 genomes]
rs3733627	0.81[CHB][hapmap];0.85[JPT][hapmap];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs3822286	0.81[CHB][hapmap];0.85[JPT][hapmap];0.83[ASN][1000 genomes]
rs4698804	1.00[EUR][1000 genomes]
rs721413	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7668395	1.00[CEU][hapmap]
rs7691725	1.00[CEU][hapmap]
rs9307346	1.00[CEU][hapmap]
rs9990841	1.00[CEU][hapmap]
rs9994891	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869392	chr4:110945459-111235071	Flanking Active TSS Weak transcription Strong transcription Active TSS Enhancers Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:110945400-110949000	Enhancers	Brain Germinal Matrix	brain

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