Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10000762	1.00[CEU][hapmap]
rs10003648	0.94[AFR][1000 genomes]
rs10008969	1.00[CEU][hapmap]
rs10011256	1.00[CEU][hapmap]
rs10021246	1.00[CEU][hapmap]
rs10021699	1.00[CEU][hapmap]
rs10024160	1.00[CEU][hapmap]
rs10025706	1.00[CEU][hapmap]
rs10028950	0.94[AFR][1000 genomes]
rs10029493	0.94[AFR][1000 genomes]
rs10029765	1.00[CEU][hapmap]
rs10029774	0.94[AFR][1000 genomes]
rs16997092	0.93[ASN][1000 genomes]
rs16997106	0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17040961	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17041311	1.00[CEU][hapmap]
rs17041322	1.00[CEU][hapmap]
rs1860131	1.00[CEU][hapmap]
rs2298750	0.83[EUR][1000 genomes]
rs28733095	0.81[AFR][1000 genomes]
rs3733613	0.83[EUR][1000 genomes]
rs7668395	1.00[CEU][hapmap]
rs7691725	1.00[CEU][hapmap]
rs9307346	1.00[CEU][hapmap]
rs9990841	1.00[CEU][hapmap]
rs9994891	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530156	chr4:110721397-110911297	Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:110800400-110807600	Weak transcription	Skeletal Muscle Male	skeletal muscle
2	chr4:110800600-110807400	Weak transcription	Psoas Muscle	Psoas

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