Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10000762	1.00[CEU][hapmap]
rs10003648	1.00[AFR][1000 genomes]
rs10008969	1.00[CEU][hapmap]
rs10011256	1.00[CEU][hapmap]
rs10021246	1.00[CEU][hapmap]
rs10021699	1.00[CEU][hapmap]
rs10024160	1.00[CEU][hapmap]
rs10025706	1.00[CEU][hapmap]
rs10028950	1.00[AFR][1000 genomes]
rs10029493	1.00[AFR][1000 genomes]
rs10029765	1.00[CEU][hapmap]
rs10029774	1.00[AFR][1000 genomes]
rs16997092	0.93[ASN][1000 genomes]
rs16997106	0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17040963	1.00[CEU][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17041311	1.00[CEU][hapmap]
rs17041322	1.00[CEU][hapmap]
rs1860131	1.00[CEU][hapmap]
rs2298750	0.83[EUR][1000 genomes]
rs3733613	0.83[EUR][1000 genomes]
rs7668395	1.00[CEU][hapmap]
rs7691725	1.00[CEU][hapmap]
rs9307346	1.00[CEU][hapmap]
rs9990841	1.00[CEU][hapmap]
rs9994891	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530156	chr4:110721397-110911297	Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:110799600-110801800	Enhancers	Pancreas	Pancrea
2	chr4:110799600-110802000	Enhancers	Placenta	Placenta
3	chr4:110800200-110800600	Enhancers	Psoas Muscle	Psoas
4	chr4:110800200-110801600	Enhancers	Skeletal Muscle Female	skeletal muscle
5	chr4:110800200-110802400	Enhancers	Placenta Amnion	Placenta Amnion
6	chr4:110800400-110801600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr4:110800400-110807600	Weak transcription	Skeletal Muscle Male	skeletal muscle

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