Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:39067188..39069142-chr7:39090366..39092625,2	K562	blood:

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10258862	0.89[CHB][hapmap];0.84[CHD][hapmap]
rs1116813	0.88[CHB][hapmap]
rs11773650	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12216590	0.84[CHD][hapmap]
rs12531789	0.89[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs12534015	0.83[ASN][1000 genomes]
rs12539432	0.96[ASN][1000 genomes]
rs12540036	0.89[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs12701690	0.89[CHB][hapmap];0.83[ASN][1000 genomes]
rs13234105	0.89[CHB][hapmap]
rs1358422	0.89[CHB][hapmap];0.95[CHD][hapmap];0.84[ASN][1000 genomes]
rs1404999	0.89[CHB][hapmap];0.84[CHD][hapmap]
rs1527949	0.89[CHB][hapmap];0.84[CHD][hapmap];0.84[ASN][1000 genomes]
rs1534416	0.88[CHB][hapmap]
rs16880005	0.89[CHB][hapmap]
rs17171520	0.86[CHB][hapmap]
rs17171521	0.89[CHB][hapmap]
rs17171526	0.89[CHB][hapmap]
rs17171527	0.89[CHB][hapmap];0.84[CHD][hapmap]
rs1881132	0.89[CHB][hapmap]
rs34013745	0.83[ASN][1000 genomes]
rs34191717	0.83[ASN][1000 genomes]
rs35218421	0.83[ASN][1000 genomes]
rs35787066	0.89[CHB][hapmap]
rs4512300	0.83[ASN][1000 genomes]
rs9691458	0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024142	chr7:38978728-39300444	Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv887967	chr7:39009307-39090698	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:39082400-39094000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr7:39083400-39091600	Weak transcription	Aorta	Aorta

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